Search result

BaseInfo

ncRNA ID novel_zma_miR2063
Species Zea mays
Class miRNA
Genome position Chr4:128103104-128103173 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 47 - AGACUGUUCGGUGCGCCCAUCGAC - 70
Stem-loop(if miRNA) --  -   C              -----  -A  G   A
  CG UGG GCGCACCGGACAGU     GC  CA UGG U
  || ||| ||||||||||||||     ||  || |||
  GC ACC CGCGUGGCUUGUCA     CG  GU GCC G
CA  U   -              GACCA  CG  G   U
Stem-loop sequence CGUGGCGCGCACCGGACAGUGCACAGUGGAUGUCCGGUGGCGCACCAGACUGUUCGGUGCGCCCAUCGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ108756.1
ncRNA:24   CAGCUACCCGCGUGGCUUGUCAGA   1
  ||||||||||||||||=||||||*
targets:141   GUCGAUGGGCGCACCGGACAGUCC   164

2.5 TSA: Zea mays contig44415, mRNA sequence NA coding protein psRNATarget