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BaseInfo

ncRNA ID	novel_zma_miR2058
Species	Zea mays
Class	miRNA
Genome position	Chr1:35233243-35233324 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287031;SRR2287159;SRR2287160;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR1997866;SRR2089698;SRR2089699;SRR2089700;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707
Length	24
Mature sequence(if miRNA)	1 - AUCCAUGAUUUGUAGUGACGGUUU - 24
Stem-loop(if miRNA)	--          A       -U    C  C          U   ACCGUCACUA AAAUCAU  AUUU UA AGGCGGUUUU U   |||||||||| |||||||  |||| || |||||||||| A   UGGCAGUGAU UUUAGUA  UAAA AU UCCGCUAAAA A UU          G       CC    A  A          C
Stem-loop sequence	ACCGUCACUAAAAAUCAUUAUUUCUACAGGCGGUUUUUUAACAAAAUCGCCUAUAAAAAUCCAUGAUUUGUAGUGACGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163473.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   |||||||||||||||||||||||| targets:34   AAACCGUCACUACAAAUCAUGGAU   57 Target Full Sequence	0.0	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
HI403012.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   |||||||||||||||||||||||| targets:34   AAACCGUCACUACAAAUCAUGGAU   57 Target Full Sequence	0.0	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   |||||||||||||||||||||||| targets:34   AAACCGUCACUACAAAUCAUGGAU   57 Target Full Sequence	0.0	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
HI403085.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   ||||||*|||||*||||||||||| targets:16   AAACCGCCACUAGAAAUCAUGGAU   39 Target Full Sequence	2.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235215.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   ||||||*|||||*||||||||||| targets:16   AAACCGCCACUAGAAAUCAUGGAU   39 Target Full Sequence	2.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
JB163546.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   ||||||*|||||*||||||||||| targets:16   AAACCGCCACUAGAAAUCAUGGAU   39 Target Full Sequence	2.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
EZ059031.1	ncRNA:24   UUUGGCAGUGAUGUUUAGUACCUA   1   |||=*||*|||||||||||||||* targets:265   AAAUGGUGACUACAAAUCAUGGAA   288 Target Full Sequence	2.0	TSA: Zea mays contig60153, mRNA sequence	NA	coding protein	psRNATarget