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BaseInfo

ncRNA ID novel_zma_miR2048
Species Zea mays
Class miRNA
Genome position Chr4:11003954-11004005 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 29 - AGGUGUGCCUUCUUUGUCGAGUGC - 52
Stem-loop(if miRNA) --              CUU    AGU
  ACUCGACAAAGAAG   UACC   U
  ||||||||||||||   ||||
  UGAGCUGUUUCUUC   GUGG   C
CG              CGU    AUC
Stem-loop sequence ACUCGACAAAGAAGCUUUACCAGUUCCUAGGUGUGCCUUCUUUGUCGAGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406743.1
ncRNA:24   CGUGAGCUGUUUCUUCCGUGUGGA   1
  |||||||=||||||*|||||||||
targets:7   GCACUCGGCAAAGAUGGCACACCU   30

2.5 Sequence 4868 from Patent EP2074227 NA coding protein psRNATarget
JB167204.1
ncRNA:24   CGUGAGCUGUUUCUUCCGUGUGGA   1
  |||||||=||||||*|||||||||
targets:7   GCACUCGGCAAAGAUGGCACACCU   30

2.5 Sequence 4868 from Patent EP2559767 NA coding protein psRNATarget
LQ238873.1
ncRNA:24   CGUGAGCUGUUUCUUCCGUGUGGA   1
  |||||||=||||||*|||||||||
targets:7   GCACUCGGCAAAGAUGGCACACCU   30

2.5 Sequence 4868 from Patent EP2985353 NA coding protein psRNATarget