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BaseInfo

ncRNA ID	novel_zma_miR2045
Species	Zea mays
Class	miRNA
Genome position	Chr1:84335695-84335816 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089712;SRR2089700;SRR2089706;SRR2089707
Length	24
Mature sequence(if miRNA)	99 - UUGGCAAAAAAGGGACUAAAAGGG - 122
Stem-loop(if miRNA)	--         A          AG    U                UC     UCCCUCUAA   UUGGCAAAA AGGGACUAAA  GGAC AAAAACUAGAGACUAA  UUUAG         C   ||||||||| ||||||||||  |||| ||||||||||||||||  |||||   AACCGUUUU UCUCUGAUUU  UCUG UUUUUGGUCUCUGAUU  GAAUC         C UA         A          GU    U                UC     CCCCACAAA
Stem-loop sequence	UUGGCAAAAAAGGGACUAAAAGGGACUAAAAACUAGAGACUAAUCUUUAGUCCCUCUAACCAAACACCCCCUAAGCUUUAGUCUCUGGUUUUUUGUCUUGUUUAGUCUCUAUUUUGCCAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008660094.2	ncRNA:24   GGGAAAAUCAGGGAAAAAACGGUU   1   |||*|||||||||||||||||||| targets:703   CCCAUUUAGUCCCUUUUUUGCCAA   726 Target Full Sequence	0.0	PREDICTED: Zea mays MYB-related transcription factor (MYBR72), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001148657.1	ncRNA:24   GGGAAAAUCAGGGAAAAAACGGUU   1   |||*|||||||||||||||||||| targets:700   CCCAUUUAGUCCCUUUUUUGCCAA   723 Target Full Sequence	0.0	Zea mays MYB-related transcription factor (MYBR72), mRNA	NA	coding protein	psRNATarget
BT042708.1	ncRNA:24   GGGAAAAUCAGGGAAAAAACGGUU   1   |||*|||||||||||||||||||| targets:700   CCCAUUUAGUCCCUUUUUUGCCAA   723 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0017B12 mRNA, complete cds	NA	coding protein	psRNATarget
EU948299.1	ncRNA:24   GGGAAAAUCAGGGAAAAAACGGUU   1   |||*|||||||||||||||||||| targets:626   CCCAUUUAGUCCCUUUUUUGCCAA   649 Target Full Sequence	0.0	Zea mays clone 372547 mRNA sequence	NA	coding protein	psRNATarget
XM_008682726.2	ncRNA:24   GGGA-AAAUCAGGGAAAAAACGGUU   1   =|=|-|||||||=|||||||||||| targets:680   UCUUGUUUAGUCUCUUUUUUGCCAA   704 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100191216 (IDP141), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT054219.1	ncRNA:24   GGGA-AAAUCAGGGAAAAAACGGUU   1   =|=|-|||||||=|||||||||||| targets:144   UCUUGUUUAGUCUCUUUUUUGCCAA   168 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0176L07 mRNA, complete cds	NA	coding protein	psRNATarget