ncRNA ID | novel_zma_miR2043 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:88071849-88072071 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711 |
Length | 23 |
Mature sequence(if miRNA) | 201 - CGCGCGCGGGAGGCAGUUGCUGG - 223 |
Stem-loop(if miRNA) |
        GGA    GU    GG G      GGA  G  G  UU C    ----     G         UUGC   CG  GU  UU       ---   AGGG G      G     C CGCGCGCG   GGCA  UGCU  C CGUGCG   GC GC GG  G UGGA    GCGCG GCGUUGCGG    UGG  CG  UG  CCGCGGG   CGU    A GCGGCC AGCCA G ||||||||   ||||  ||||  | ||||||   || || ||  | ||||    ||||| |||||||||    |||  ||  ||  |||||||   |||    | |||||| ||||| C GCGUGCGC   UCGU  ACGG  G GCGCGC   CG CG UU  U ACCU    CGUGC CGCGGCGCC    GCC  GC  GC  GGCGCCU   GCG    U CGUCGG UCGGU C         -GG    UG    -A G      --G  G  G  GG -    AAGG     G         -UAA   AU  UG  --       AAG   AGGG G      -     A |
Stem-loop sequence | CGCGCGCGGGAGGCAGUUGCUGGCGCGUGCGGGAGCGGCGGGUUGCUGGAGCGCGGGCGUUGCGGUUGCUGGCGCGGUUGUUCCGCGGGCGUAGGGAGGCGGCCGAGCCACGCCAUGGCUGGCUGCGUGGGAGCGGAAUCCGCGGCGGUCGUACCGAAUCCGCGGCGCGCGUGCGGAAUCCAUGGUUGGCGGCGCGCGCGGGAGGCAGUUGCUGGCGCGUGCG |