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BaseInfo

ncRNA ID novel_zma_miR2043
Species Zea mays
Class miRNA
Genome position Chr1:88071849-88072071 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 23
Mature sequence(if miRNA) 201 - CGCGCGCGGGAGGCAGUUGCUGG - 223
Stem-loop(if miRNA)         GGA    GU    GG G      GGA  G  G  UU C    ----     G         UUGC   CG  GU  UU       ---   AGGG G      G     C
CGCGCGCG   GGCA  UGCU  C CGUGCG   GC GC GG  G UGGA    GCGCG GCGUUGCGG    UGG  CG  UG  CCGCGGG   CGU    A GCGGCC AGCCA G
||||||||   ||||  ||||  | ||||||   || || ||  | ||||    ||||| |||||||||    |||  ||  ||  |||||||   |||    | |||||| ||||| C
GCGUGCGC   UCGU  ACGG  G GCGCGC   CG CG UU  U ACCU    CGUGC CGCGGCGCC    GCC  GC  GC  GGCGCCU   GCG    U CGUCGG UCGGU C
        -GG    UG    -A G      --G  G  G  GG -    AAGG     G         -UAA   AU  UG  --       AAG   AGGG G      -     A
Stem-loop sequence CGCGCGCGGGAGGCAGUUGCUGGCGCGUGCGGGAGCGGCGGGUUGCUGGAGCGCGGGCGUUGCGGUUGCUGGCGCGGUUGUUCCGCGGGCGUAGGGAGGCGGCCGAGCCACGCCAUGGCUGGCUGCGUGGGAGCGGAAUCCGCGGCGGUCGUACCGAAUCCGCGGCGCGCGUGCGGAAUCCAUGGUUGGCGGCGCGCGCGGGAGGCAGUUGCUGGCGCGUGCG