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BaseInfo

ncRNA ID	ath-miRf10028-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UACUCGACCUCUGGGUCGAGUG - NA
Stem-loop(if miRNA)	UG  AA          C          -  U  GA     --UGAUG   AGGUGAUGGAGACGCUCGACCUCGUGGUCGAGUGGUGAGG GUGG  AA  CACUCGACCU GGGGUCGAGU GA GU  UCGAG       GUC                                        U ||||  ||  |||||||||| |||||||||| || ||  |||||       ||| UACU  UU  GUGAGCUGGG CUCCAGCUCA CU CG  AGUUC       CUC                                        G     GU  -G          U          U  U  -A     UAGAGUU   UGGUGAGCUGGGGCUCCAGCUCAUCUUCUGUAGUGGUGAA
Stem-loop sequence	GUGGUGAAAACACUCGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUGAUGGAGACGCUCGACCUCGUGGUCGAGUGGUGAGGUGAAGUGGUGAUGUCUUCUACUCGACCUCGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUUCUACUCGACCUCUGGGUCGAGUGGUUUGUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:22   GUGAGCUGGGUCUCCAGCUCAU   1   |||||||||||||||||||||| targets:764   CACUCGACCCAGAGGUCGAGUA   785 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
AY227642.1	ncRNA:22   GUGAGCUGGGUCUCCAGCUCAU   1   ||||||||||*||||||||||= targets:855   CACUCGACCCCGAGGUCGAGUG   876 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
AY227642.1	ncRNA:22   GUGAGCUGGGUCUCCAGCUCAU   1   |||||*|||=|||||||||||| targets:927   CACUCUACCUAGAGGUCGAGUA   948 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   GUGAGCUGGGUCUCCAGCUCAU   1   ||||||||||*||||||||||= targets:1618   CACUCGACCCCGAGGUCGAGUG   1639 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:22   GUGAGCUGGGUCUCCAGCUCAU   1   |||||*|||*|||||||||||| targets:576   CACUCUACCAAGAGGUCGAGUA   597 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget