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BaseInfo

ncRNA ID	novel_zma_miR2028
Species	Zea mays
Class	miRNA
Genome position	Chr1:221967491-221967567 [-]
Reference genome	RefGen_v4
Source	SRR2089711
Length	24
Mature sequence(if miRNA)	54 - UAUGUGUAGAAACCUAGCCGGCCU - 77
Stem-loop(if miRNA)	--                        C    -      U   UAUGUGUAGAAACCUAGCCGGCCU CAUA GAAGUU U   |||||||||||||||||||||||| |||| ||||||   AUACACAUCUUUGGAUCGGCCGGA GUAU CUUUAA A UG                        A    A      U
Stem-loop sequence	UAUGUGUAGAAACCUAGCCGGCCUCCAUAGAAGUUUUAUAAUUUCAUAUGAAGGCCGGCUAGGUUUCUACACAUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403209.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**||||||||||||||||| targets:141   AGUUCUCCUAGGUUUCUACACAUA   164 Target Full Sequence	2.0	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**||||||||||||||||| targets:141   AGUUCUCCUAGGUUUCUACACAUA   164 Target Full Sequence	2.0	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
JB163670.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**||||||||||||||||| targets:141   AGUUCUCCUAGGUUUCUACACAUA   164 Target Full Sequence	2.0	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242225.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:64   AGUUCUCUUAGGUUUCUACACAUA   87 Target Full Sequence	3.0	Sequence 8220 from Patent EP2985353	NA	coding protein	psRNATarget
JB170556.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:64   AGUUCUCUUAGGUUUCUACACAUA   87 Target Full Sequence	3.0	Sequence 8220 from Patent EP2559767	NA	coding protein	psRNATarget
HI410095.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:64   AGUUCUCUUAGGUUUCUACACAUA   87 Target Full Sequence	3.0	Sequence 8220 from Patent EP2074227	NA	coding protein	psRNATarget
HI403202.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:65   AGUUCUCUUAGGUUUCUACACAUA   88 Target Full Sequence	3.0	Sequence 1327 from Patent EP2074227	NA	coding protein	psRNATarget
JB163663.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:65   AGUUCUCUUAGGUUUCUACACAUA   88 Target Full Sequence	3.0	Sequence 1327 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235332.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:65   AGUUCUCUUAGGUUUCUACACAUA   88 Target Full Sequence	3.0	Sequence 1327 from Patent EP2985353	NA	coding protein	psRNATarget
HI402968.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:67   AGUUCUCUUAGGUUUCUACACAUA   90 Target Full Sequence	3.0	Sequence 1093 from Patent EP2074227	NA	coding protein	psRNATarget
JB163429.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:67   AGUUCUCUUAGGUUUCUACACAUA   90 Target Full Sequence	3.0	Sequence 1093 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235098.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*=|**=|||||||||||||||| targets:67   AGUUCUCUUAGGUUUCUACACAUA   90 Target Full Sequence	3.0	Sequence 1093 from Patent EP2985353	NA	coding protein	psRNATarget
HI403222.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*==**=|||||||||||||||| targets:135   AGUUUUCUUAGGUUUCUACACAUA   158 Target Full Sequence	3.0	Sequence 1347 from Patent EP2074227	NA	coding protein	psRNATarget
JB163683.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*==**=|||||||||||||||| targets:135   AGUUUUCUUAGGUUUCUACACAUA   158 Target Full Sequence	3.0	Sequence 1347 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235352.1	ncRNA:24   UCCGGCCGAUCCAAAGAUGUGUAU   1   ||*==**=|||||||||||||||| targets:135   AGUUUUCUUAGGUUUCUACACAUA   158 Target Full Sequence	3.0	Sequence 1347 from Patent EP2985353	NA	coding protein	psRNATarget