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BaseInfo

ncRNA ID	osa-miR2926
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:11402605-11402724 [+]
Reference genome	MSU7
Source	miRBase
Length	20
Mature sequence(if miRNA)	42 - AGGUCGUCGACGUUGGUGCU - 61
Stem-loop(if miRNA)	---GUGGUG  ----    G   UCACGUACUGCUGUGAGGAUGGUCGAGGUCGUCGACGUUG          CC    UCAC AGC                                        G          ||    |||| |||          CC    UCUA GCA                                        U UUGUCUGUU  UCUA    -   CUGGACACCACCACCGGUAACACACGCACUGCCGUCCUCG
Stem-loop sequence	GUGGUGCCUCACGAGCUCACGUACUGCUGUGAGGAUGGUCGAGGUCGUCGACGUUGGUGCUCCUGCCGUCACGCACACAAUGGCCACCACCACAGGUCACGAUCUAUCUCCUUGUCUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015782953.1	ncRNA:20   UCGUGGUUGCAGCUGCUGGA   1   ||||=||||||||=|||||| targets:1258   AGCAUCAACGUCGGCGACCU   1277 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group histone deacetylase 19-like (LOC107275687), mRNA	histone deacetylase 19-like(LOC107275687)	coding protein	psRNATarget
AK110310.1	ncRNA:20   UCGUGGUUGCAGCUGCUGGA   1   |||=*|*||||||||||||| targets:690   AGCGGCUACGUCGACGACCU   709 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-164-B04, full insert sequence	NA	coding protein	psRNATarget
XM_015764933.1	ncRNA:20   UCGUGGUUGCAGCUGCUGGA   1   |||=*|*||||||||||||| targets:805   AGCGGCUACGUCGACGACCU   824 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IX.1 (LOC4352751), mRNA	L-type lectin-domain containing receptor kinase IX.1(LOC4352751)	coding protein	psRNATarget

Reference

1	PMID:20131478 "Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses"; Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK; Mol Genet Genomics. 282:463-474(2009).