Search result

BaseInfo

ncRNA ID novel_zma_miR2014
Species Zea mays
Class miRNA
Genome position Chr4:105580325-105580424 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 77 - ACCGUCUGUGAUGUUGUCUAUCAC - 100
Stem-loop(if miRNA) --                       U    AG              A UU
  GAUAGAUAACAUCACAGGCGGUU UUUA  UCGACCGCCUGUGA G  A
  ||||||||||||||||||||||| ||||  |||||||||||||| |
  CUAUCUGUUGUAGUGUCUGCCAA AAGU  AGCUGGCGGACACU U  A
CA                       C    AA              A UU
Stem-loop sequence GAUAGAUAACAUCACAGGCGGUUUUUUAAGUCGACCGCCUGUGAAGUUAAUUUAUCACAGGCGGUCGAAAUGAACAACCGUCUGUGAUGUUGUCUAUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538460.1
ncRNA:24   CACUAUCUGUUGUAGUGUCUGCCA   1
  **||-|||||||||||*||||||*
targets:395   UCGA-AGACAACAUCAAAGACGGC   417

2.5 PREDICTED: Zea mays hydroxyproline O-galactosyltransferase GALT6-like (LOC109939944), mRNA NA coding protein psRNATarget
XM_008667070.2
ncRNA:24   CACUAUCUGUUGUAGUGUCUGCCA   1
  **||-|||||||||||*||||||*
targets:880   UCGA-AGACAACAUCAAAGACGGC   902

2.5 PREDICTED: Zea mays hydroxyproline O-galactosyltransferase GALT6 (LOC103643899), mRNA NA coding protein psRNATarget