ncRNA ID | novel_zma_miR2014 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:105580325-105580424 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 77 - ACCGUCUGUGAUGUUGUCUAUCAC - 100 |
Stem-loop(if miRNA) |
--                       U    AG              A UU   GAUAGAUAACAUCACAGGCGGUU UUUA  UCGACCGCCUGUGA G  A   ||||||||||||||||||||||| ||||  |||||||||||||| |   CUAUCUGUUGUAGUGUCUGCCAA AAGU  AGCUGGCGGACACU U  A CA                       C    AA              A UU |
Stem-loop sequence | GAUAGAUAACAUCACAGGCGGUUUUUUAAGUCGACCGCCUGUGAAGUUAAUUUAUCACAGGCGGUCGAAAUGAACAACCGUCUGUGAUGUUGUCUAUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538460.1 |
|
2.5 | PREDICTED: Zea mays hydroxyproline O-galactosyltransferase GALT6-like (LOC109939944), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008667070.2 |
|
2.5 | PREDICTED: Zea mays hydroxyproline O-galactosyltransferase GALT6 (LOC103643899), mRNA | NA | coding protein | psRNATarget |