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BaseInfo

ncRNA ID novel_zma_miR2008
Species Zea mays
Class miRNA
Genome position Chr1:305343936-305344038 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2287159;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR3341856;SRR4237220;SRR4237221;SRR4237225;SRR4237226;SRR4237227;SRR5105959;SRR2089700;SRR2089701
Length 21
Mature sequence(if miRNA) 83 - AAGAAUGGAGGCGGGAGGACC - 103
Stem-loop(if miRNA) --           C             A         AUAUUUCAAAUCAA
  AAGAAUGGAGG GGGAGGACCUUUU AAAAAUAUC              G
  ||||||||||| ||||||||||||| |||||||||              A
  UUCUUACUUCC CCCUCUUGGAAAA UUUUUAUAG              C
UG           A             A         GUCCCCUCCACCUU
Stem-loop sequence AAGAAUGGAGGCGGGAGGACCUUUUAAAAAAUAUCAUAUUUCAAAUCAAGACUUCCACCUCCCCUGGAUAUUUUUAAAAAGGUUCUCCCACCUUCAUUCUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001114650.2
ncRNA:21   CCAGGAGGGCGGAGGUAAGAA   1
  ***||||||||||||*|||||
targets:61   CCCCCUCCCGCCUCCCUUCUU   81

2.5 Zea mays early responsive to dehydration protein (ERD4), mRNA NA coding protein psRNATarget