ncRNA ID | novel_zma_miR2008 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:305343936-305344038 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2287159;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR3341856;SRR4237220;SRR4237221;SRR4237225;SRR4237226;SRR4237227;SRR5105959;SRR2089700;SRR2089701 |
Length | 21 |
Mature sequence(if miRNA) | 83 - AAGAAUGGAGGCGGGAGGACC - 103 |
Stem-loop(if miRNA) |
--           C             A         AUAUUUCAAAUCAA   AAGAAUGGAGG GGGAGGACCUUUU AAAAAUAUC              G   ||||||||||| ||||||||||||| |||||||||              A   UUCUUACUUCC CCCUCUUGGAAAA UUUUUAUAG              C UG           A             A         GUCCCCUCCACCUU |
Stem-loop sequence | AAGAAUGGAGGCGGGAGGACCUUUUAAAAAAUAUCAUAUUUCAAAUCAAGACUUCCACCUCCCCUGGAUAUUUUUAAAAAGGUUCUCCCACCUUCAUUCUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001114650.2 |
|
2.5 | Zea mays early responsive to dehydration protein (ERD4), mRNA | NA | coding protein | psRNATarget |