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BaseInfo

ncRNA ID novel_zma_miR1981
Species Zea mays
Class miRNA
Genome position Chr9:105441703-105441770 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089715;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - GCUCUCUGUAGAGGCGCGGACGGU - 24
Stem-loop(if miRNA) --     C    -G   -       G    GC    
  GCUCU UGUA  AGG CGCGGAC GUCC  GGCCA
  ||||| ||||  ||| ||||||| ||||  ||||G
  CGGGA ACGU  UCC GCGCCUG CAGG  CCGGG
UU     -    GG   A       G    --    
Stem-loop sequence GCUCUCUGUAGAGGCGCGGACGGUCCGCGGCCAGGGGCCGGACGGUCCGCGACCUGGUGCAAGGGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409322.1
ncRNA:24   UGGCAGGCGCGGAGAUGUCUCUCG   1
  |||*||||=|||||*|||||||||
targets:64   ACCAUCCGUGCCUCCACAGAGAGC   87

2.5 Sequence 7447 from Patent EP2074227 NA coding protein psRNATarget
JB169783.1
ncRNA:24   UGGCAGGCGCGGAGAUGUCUCUCG   1
  |||*||||=|||||*|||||||||
targets:64   ACCAUCCGUGCCUCCACAGAGAGC   87

2.5 Sequence 7447 from Patent EP2559767 NA coding protein psRNATarget
LQ241452.1
ncRNA:24   UGGCAGGCGCGGAGAUGUCUCUCG   1
  |||*||||=|||||*|||||||||
targets:64   ACCAUCCGUGCCUCCACAGAGAGC   87

2.5 Sequence 7447 from Patent EP2985353 NA coding protein psRNATarget