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BaseInfo

ncRNA ID	novel_zma_miR1967
Species	Zea mays
Class	miRNA
Genome position	Chr4:6688943-6689062 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	97 - AGAAAUACGAUUUUUAGUGGCAGU - 120
Stem-loop(if miRNA)	--C              -       C                   UC  UA  A    UCA    GCCAUUAGAAAUCG AUUUCUA AGGUGGUUUCUUAAGAAAA  GU  CU UAAA   U    |||||||||||||| ||||||| |||||||||||||||||||  ||  || ||||   G    CGGUGAUUUUUAGC UAAAGAU UCCACUAAGGAAUUCUUUU  CG  GA AUUU   A UGA              A       A                   UA  --  C    UUA
Stem-loop sequence	CGCCAUUAGAAAUCGAUUUCUACAGGUGGUUUCUUAAGAAAAUCGUUACUAUAAAUCAUGAAUUUUUACAGGCAUUUUUCUUAAGGAAUCACCUAUAGAAAUACGAUUUUUAGUGGCAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163447.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|||||||=|||||||||||=| targets:18   ACCGCCACUAGAAAUCGUAUUUUU   41 Target Full Sequence	2.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|||||||=|||||||||||=| targets:18   ACCGCCACUAGAAAUCGUAUUUUU   41 Target Full Sequence	2.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|||||||=|||||||||||=| targets:18   ACCGCCACUAGAAAUCGUAUUUUU   41 Target Full Sequence	2.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|||||||=||||||||||||* targets:40   ACCGCCACUAGAAAUCGUAUUUCC   63 Target Full Sequence	2.0	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
JB166343.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|||||||=||||||||||||* targets:40   ACCGCCACUAGAAAUCGUAUUUCC   63 Target Full Sequence	2.0	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
HI405882.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|||||||=||||||||||||* targets:40   ACCGCCACUAGAAAUCGUAUUUCC   63 Target Full Sequence	2.0	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
HI402984.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|=|||||=|||||*||||||| targets:18   ACCGUCACUAGAAAUCAUAUUUCU   41 Target Full Sequence	2.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|=|||||=|||||*||||||| targets:18   ACCGUCACUAGAAAUCAUAUUUCU   41 Target Full Sequence	2.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
JB163445.1	ncRNA:24   UGACGGUGAUUUUUAGCAUAAAGA   1   ||*|=|||||=|||||*||||||| targets:18   ACCGUCACUAGAAAUCAUAUUUCU   41 Target Full Sequence	2.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget