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BaseInfo

ncRNA ID novel_zma_miR1963
Species Zea mays
Class miRNA
Genome position Chr9:88225656-88225807 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2089706
Length 24
Mature sequence(if miRNA) 1 - AUUAAUUGUUAAUCCCCGUCGGCC - 24
Stem-loop(if miRNA) --  A   A         C     U C        C                 AG  AA            U   U
  CC ACG GGAUUAACA UUAAU C CGUCGGCC AGUAACUCUCGUCGGCC  AC  GGCCGACGGGAA UAU C
  || ||| ||||||||| ||||| | |||||||| |||||||||||||||||  ||  |||||||||||| |||
  GG UGC CCUAAUUGU AAUUA G GCAGCCGG UCAUUGAGGGCAGCCGG  UG  UUGGCUGCCCUU AUA G
CC  C   C         U     C U        A                 GA  GA            U   A
Stem-loop sequence CCAACGAGGAUUAACACUUAAUUCCCGUCGGCCCAGUAACUCUCGUCGGCCAGACAAGGCCGACGGGAAUUAUUCGAAUAUUUCCCGUCGGUUAGGUAGGGCCGACGGGAGUUACUAGGCCGACGUGCAUUAAUUGUUAAUCCCCGUCGGCC