ncRNA ID | novel_zma_miR1963 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:88225656-88225807 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2089706 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUAAUUGUUAAUCCCCGUCGGCC - 24 |
Stem-loop(if miRNA) |
--  A   A         C     U C        C                 AG  AA            U   U   CC ACG GGAUUAACA UUAAU C CGUCGGCC AGUAACUCUCGUCGGCC  AC  GGCCGACGGGAA UAU C   || ||| ||||||||| ||||| | |||||||| |||||||||||||||||  ||  |||||||||||| |||   GG UGC CCUAAUUGU AAUUA G GCAGCCGG UCAUUGAGGGCAGCCGG  UG  UUGGCUGCCCUU AUA G CC  C   C         U     C U        A                 GA  GA            U   A |
Stem-loop sequence | CCAACGAGGAUUAACACUUAAUUCCCGUCGGCCCAGUAACUCUCGUCGGCCAGACAAGGCCGACGGGAAUUAUUCGAAUAUUUCCCGUCGGUUAGGUAGGGCCGACGGGAGUUACUAGGCCGACGUGCAUUAAUUGUUAAUCCCCGUCGGCC |