ncRNA ID | novel_zma_miR1962 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:95289034-95289166 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGGUCUGCGACCUGGUGCAGGAG - 24 |
Stem-loop(if miRNA) |
    --GG     -       G     U G    G G -     G       A C    GU   -   G CUCU    UCAGG CGCGGAC GUCCG G CCUG G C CGGAC GUCCGCG C UGGC  GAG GCG C ||||    ||||| ||||||| ||||| | |||| | | ||||| ||||||| | ||||  ||| ||| GAGG    GGUCC GCGUCUG CAGGC C GGGC C G GCCUG CAGGCGC G ACUG  CUC CGU U     ACGU     A       G     - G    A G C     G       - A    GU   U   G |
Stem-loop sequence | CUCUGGUCAGGCGCGGACGGUCCGUGGCCUGGGGCCGGACGGUCCGCGACCUGGCGUGAGGCGGCUGUGCUCUCUGGUCAAGCGCGGACGGUCCGCGGCACGGGGCCGGACGGUCUGCGACCUGGUGCAGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU950447.1 |
|
2.5 | Zea mays clone 491631 mRNA sequence | NA | coding protein | psRNATarget |