ncRNA ID | osa-miR1320-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:5073507-5073602 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 64 - UGGAACGGAGGAAUUUUAUAG - 84 |
Stem-loop(if miRNA) |
---U    C    U          G             UU    CGGGA     UAGG CUAC UUGGAACGGA GAAUUUUAUAGGA  UUUG     A     |||| |||| |||||||||| |||||||||||||  ||||     AUCC GAUG AACCUUGCUU CUUAAAAUGUCCU  AGAC     U GAUU    C    U          A             -U    AAUUU |
Stem-loop sequence | UUAGGCCUACUUUGGAACGGAGGAAUUUUAUAGGAUUUUUGCGGGAAUUUUAACAGAUUCCUGUAAAAUUCAUUCGUUCCAAUGUAGCCCUAUUAG |
1 | PMID:18323537
"Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa"; Morin RD, Aksay G, Dolgosheina E, Ebhardt HA, Magrini V, Mardis ER, Sahinalp SC, Unrau PJ; Genome Res. 18:571-584(2008). |
2 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |