ncRNA ID | novel_zma_miR1956 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:117620153-117620256 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941;SRR1583944;SRR2647221;SRR2647390;SRR1583942 |
Length | 21 |
Mature sequence(if miRNA) | 84 - UACUCUAUUAUUUAUCUUAAU - 104 |
Stem-loop(if miRNA) |
--       U             CUA   A          GAUUG    GUAAA   UACUCUA UAUUUAUCUUAAU   UAU UAUUGAGGUG     GGGU     U   ||||||| |||||||||||||   ||| ||||||||||     ||||   AUGAGAU AUAAGUAGGGUUA   GUA AUAACUCCAC     UUCA     U CU       C             UGG   C          ----A    AUUGU |
Stem-loop sequence | UACUCUAUUAUUUAUCUUAAUCUAUAUAUAUUGAGGUGGAUUGGGGUGUAAAUUUGUUAACUUACACCUCAAUACAUGGGUAUUGGGAUGAAUACUAGAGUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069846.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0304I20 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT084613.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0145P16 mRNA, complete cds | NA | coding protein | psRNATarget |