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BaseInfo

ncRNA ID novel_zma_miR1955
Species Zea mays
Class miRNA
Genome position Chr9:15030492-15030541 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089713;SRR2089714;SRR1997865;SRR1997866;SRR2089700;SRR2089704;SRR2089705
Length 22
Mature sequence(if miRNA) 1 - AGGACGGCGAUUAGGCCUGCUA - 22
Stem-loop(if miRNA) --   A     A    G   GCUAU
  AGG CGGCG UUAG CCU     G
  ||| ||||| |||| |||
  UCC GUUGU AGUC GGG     U
CA   G     G    G   UAUAU
Stem-loop sequence AGGACGGCGAUUAGGCCUGCUAUGUUAUAUGGGGCUGAGUGUUGGCCUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ081170.1
ncRNA:22   AUCGUCCGGAUUAGCGGCAGGA   1
  |||||||=|||||||||*||||
targets:61   UAGCAGGUCUAAUCGCCAUCCU   82

2.5 TSA: Zea mays contig16810, mRNA sequence NA coding protein psRNATarget