ncRNA ID | novel_zma_miR1945 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:83158616-83158833 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089712;SRR2089715;SRR5451003;SRR5451004;SRR5451005;SRR1583942;SRR2089700;SRR2089701;SRR2089704;SRR2089705 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CCAUACGAUGGUGAGCCGGUGU - 22 |
Stem-loop(if miRNA) |
--   U                     A                                         G   G                    G  G  G       U   CCA ACGAUGGUGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G   ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || || |||||||   GGU UGCUACCACUCGGCCACAUGA ACAGGCCUACACACCAGUGUUUUAAAUUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CC   C                     G                                         A   G                    A  G  G       U |
Stem-loop sequence | CCAUACGAUGGUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUCUGGCC |