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BaseInfo

ncRNA ID novel_zma_miR1945
Species Zea mays
Class miRNA
Genome position Chr8:83158616-83158833 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089712;SRR2089715;SRR5451003;SRR5451004;SRR5451005;SRR1583942;SRR2089700;SRR2089701;SRR2089704;SRR2089705
Length 22
Mature sequence(if miRNA) 1 - CCAUACGAUGGUGAGCCGGUGU - 22
Stem-loop(if miRNA) --   U                     A                                         G   G                    G  G  G       U
  CCA ACGAUGGUGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G
  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || || |||||||
  GGU UGCUACCACUCGGCCACAUGA ACAGGCCUACACACCAGUGUUUUAAAUUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A
CC   C                     G                                         A   G                    A  G  G       U
Stem-loop sequence CCAUACGAUGGUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUCUGGCC