ncRNA ID | novel_zma_miR1935 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:91834658-91834729 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2647343;SRR2647385;SRR2647388;SRR2647389;SRR2647391;SRR2647467;SRR1583943 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGGAUCUAAUCCAGAGAGGGAUU - 24 |
Stem-loop(if miRNA) |
--GU     U     A   A           UAUCC     GGAUC AAUCC GAG GGGAUUGAGUG     C     ||||| ||||| ||| |||||||||||     U     CCUAG UUGGG UUC CCCUAACUCAC     U UUUC     U     G   -           UUUCC |
Stem-loop sequence | GUGGAUCUAAUCCAGAGAGGGAUUGAGUGUAUCCCUUCCUUUCACUCAAUCCCCUUGGGGUUUGAUCCCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU945457.1 |
|
1.0 | Zea mays clone 273811 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020538427.1 |
|
2.0 | PREDICTED: Zea mays uncharacterized LOC103626597 (LOC103626597), mRNA | NA | coding protein | psRNATarget | |||||||||
EU944692.1 |
|
3.0 | Zea mays clone 226450 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ072294.1 |
|
2.5 | TSA: Zea mays contig07931, mRNA sequence | NA | coding protein | psRNATarget |