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BaseInfo

ncRNA ID novel_zma_miR1926
Species Zea mays
Class miRNA
Genome position Chr8:130614494-130614548 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 21
Mature sequence(if miRNA) 1 - UGCGCCAGGCUGGACUUCGGU - 21
Stem-loop(if miRNA) --    CU       --           A
  CGGA  GUUCGGU  GGUGCACCGGA A
  ||||  |||||||  ||||||||||| G
  GCUU  CAGGUCG  CCGCGUGGCCU U
UG    --       GA           G
Stem-loop sequence CGGACUGUUCGGUGGUGCACCGGAAAGUGUCCGGUGCGCCAGGCUGGACUUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175715.1
ncRNA:21   UGGCUUCAGGUCGGACCGCGU   1
  ||||=||*|||||||||||||
targets:767   ACCGGAGACCAGCCUGGCGCA   787

2.0 Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA NA coding protein psRNATarget
BT066013.2
ncRNA:21   UGGCUUCAGGUCGGACCGCGU   1
  ||||=||*|||||||||||||
targets:767   ACCGGAGACCAGCCUGGCGCA   787

2.0 Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds NA coding protein psRNATarget