ncRNA ID | novel_zma_miR1925 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:45991442-45991610 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGGUGGUUAUCUUAACACAACC - 24 |
Stem-loop(if miRNA) |
--                 C                                 G     -G  GUA  AG          A    C   ACUGGUGGUUAUCUUAA ACAACCGCCAGUGGAAAUAGGGUAUUUACACUG CGGUU  GU   AC  AACCGCCAGU GAAA C   ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  ||   ||  |||||||||| ||||   UGACCGCCAAUAGAAUU UGUUGGCGGUCACCUUUAUCCCAUAAAUGUGAC GCCAA  CA   UG  UUGGCGGUCA CUUU A GG                 A                                 -     GA  AUG  -G          C    A |
Stem-loop sequence | ACUGGUGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGGUAUUUACACUGGCGGUUGGUGUAACAGAACCGCCAGUAGAAACCAAUUUCCACUGGCGGUUGGUGUAACAGAACCGCAGUGUAAAUACCCUAUUUCCACUGGCGGUUGUAUUAAGAUAACCGCCAGUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT063235.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0041B21 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT063734.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0101P15 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT068916.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0272E21 mRNA, complete cds | NA | coding protein | psRNATarget |