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BaseInfo

ncRNA ID novel_zma_miR1923
Species Zea mays
Class miRNA
Genome position Chr8:140257555-140257631 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089698;SRR2089704;SRR2089706
Length 24
Mature sequence(if miRNA) 1 - GGUUCAAGAGUAGAAUAGAGCGGA - 24
Stem-loop(if miRNA) --             G     --         C     CG
  CGUUCUAUUCUAC UUUGG  CAAGCAGAA AGAGU  C
  ||||||||||||| |||||  ||||||||| |||||
  GCGAGAUAAGAUG GAACU  GUUUGUUUU UUUUA  U
AG             A     UG         -     UC
Stem-loop sequence CGUUCUAUUCUACGUUUGGCAAGCAGAACAGAGUCGCUCUAUUUUUUUUGUUUGGUUCAAGAGUAGAAUAGAGCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   AGGCGAGAUAAGAUGAGAACUUGG   1
  |||||||||||||||||||*||||
targets:106   UCCGCUCUAUUCUACUCUUCAACC   129

1.5 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   AGGCGAGAUAAGAUGAGAACUUGG   1
  |||*|||||||||||||||*|||*
targets:1038   UCCACUCUAUUCUACUCUUCAACG   1061

2.5 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget