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BaseInfo

ncRNA ID novel_zma_miR1917
Species Zea mays
Class miRNA
Genome position Chr8:18538242-18538293 [+]
Reference genome RefGen_v4
Source SRR2089711
Length 25
Mature sequence(if miRNA) 28 - UGCUCUCUGGUCAGGCGCGGACGAU - 52
Stem-loop(if miRNA) --G       A      GC   -   G
   GUCCGCG CCUGGC  GAG GCG C
   ||||||| ||||||  ||| |||
   CAGGCGC GGACUG  CUC CGU G
UAG       -      GU   U   G
Stem-loop sequence GGUCCGCGACCUGGCGCGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:25   UAGCAGGCGCGGACUGGUCUCUCGU   1
  |*||||||||=||||||||||||||
targets:26   ACCGUCCGCGUCUGACCAGAGAGCA   50

1.0 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget