ncRNA ID | novel_zma_miR1916 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:177494973-177495109 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089713;SRR5099742;SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AUAGAUGAAGAAUAAACGACGAGA - 137 |
Stem-loop(if miRNA) |
--        AG           A          CUAAC      A       CAA     UCAUAUAGCA   AUAGAUGA  AAUAAACGACG GACAAAUUUA     UAAUCC UAAUUAG   AUGUU          U   ||||||||  ||||||||||| ||||||||||     |||||| |||||||   |||||          A   UAUCUACU  UUAUUUGUUGC CUGUUUAGAU     AUUAGG AUUAAUC   GUACU          A UA        CU           C          ----A      -       -AG     AGGUGAGUAC |
Stem-loop sequence | AUAGAUGAAGAAUAAACGACGAGACAAAUUUACUAACUAAUCCAUAAUUAGCAAAUGUUUCAUAUAGCAUAACAUGAGUGGAUCAUGGACUAAUUAGGAUUAAUAGAUUUGUCCCGUUGUUUAUUUCUCAUCUAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT065385.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0132E14 mRNA, complete cds | NA | coding protein | psRNATarget |