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BaseInfo

ncRNA ID novel_zma_miR1916
Species Zea mays
Class miRNA
Genome position Chr8:177494973-177495109 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089713;SRR5099742;SRR1997866
Length 24
Mature sequence(if miRNA) 114 - AUAGAUGAAGAAUAAACGACGAGA - 137
Stem-loop(if miRNA) --        AG           A          CUAAC      A       CAA     UCAUAUAGCA
  AUAGAUGA  AAUAAACGACG GACAAAUUUA     UAAUCC UAAUUAG   AUGUU          U
  ||||||||  ||||||||||| ||||||||||     |||||| |||||||   |||||          A
  UAUCUACU  UUAUUUGUUGC CUGUUUAGAU     AUUAGG AUUAAUC   GUACU          A
UA        CU           C          ----A      -       -AG     AGGUGAGUAC
Stem-loop sequence AUAGAUGAAGAAUAAACGACGAGACAAAUUUACUAACUAAUCCAUAAUUAGCAAAUGUUUCAUAUAGCAUAACAUGAGUGGAUCAUGGACUAAUUAGGAUUAAUAGAUUUGUCCCGUUGUUUAUUUCUCAUCUAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT065385.2
ncRNA:24   AGAGCAGCAAAUAAGAAGUAGAUA   1
  |||=*||*||||*|||||||||||
targets:850   UCUUAUCUUUUAGUCUUCAUCUAU   873

2.5 Zea mays full-length cDNA clone ZM_BFb0132E14 mRNA, complete cds NA coding protein psRNATarget