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BaseInfo

ncRNA ID osa-miR2931
Species Oryza sativa
Class miRNA
Genome position Chr6:1893771-1893924 [+]
Reference genome MSU7
Source miRBase
Length 20
Mature sequence(if miRNA) 47 - CUUUAUUGUUGAUGUCAAAA - 66
Stem-loop(if miRNA) --AAAAAA   -  UUUGCCACUUCUUUAUUUUAUUGAUGCAUUUAUGUCUUUAUUGUUGAUGUCAAAAAUUUAUCG
        CAA UG                                                               A
        ||| ||                                                               U
        CCA GU                                                               C
UACCUCCC   A  AUUAACAUGGUGUUCAUAUAGUUAUAUAUAUAUUGAAGUUCGAUUUAAAAGUUACGUUGGCGA
Stem-loop sequence AAAAAACAAUGUUUGCCACUUCUUUAUUUUAUUGAUGCAUUUAUGUCUUUAUUGUUGAUGUCAAAAAUUUAUCGAUCAGCGGUUGCAUUGAAAAUUUAGCUUGAAGUUAUAUAUAUAUUGAUAUACUUGUGGUACAAUUAUGAACCCCCUCCAU

Reference

1 PMID:20131478
"Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses";
Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK;
Mol Genet Genomics. 282:463-474(2009).