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BaseInfo

ncRNA ID novel_zma_miR1903
Species Zea mays
Class miRNA
Genome position Chr8:136273511-136273595 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089713
Length 24
Mature sequence(if miRNA) 62 - AGUAAAUUAGGGACUAAAAUGGAA - 85
Stem-loop(if miRNA) --            A   A          G            
  CCAUUUUAGUUC UAA UUGUUAAAUA GGAAACUAAAAUA
  |||||||||||| ||| |||||||||| ||||||||||||U
  GGUAAAAUCAGG AUU AAUGAUUUAU UCUUUGAUUUUGA
AA            G   A          A            
Stem-loop sequence CCAUUUUAGUUCAUAAAUUGUUAAAUAGGGAAACUAAAAUAUAGUUUUAGUUUCUAUAUUUAGUAAAUUAGGGACUAAAAUGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT019141.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:309   UUCCAUUUUAGUCCCUAAAUUACU   332

1.5 Zea mays clone Contig786.F mRNA sequence NA coding protein psRNATarget
JB167174.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:184   UUCCAUUUUAGUCCCUAAAUUACU   207

1.5 Sequence 4838 from Patent EP2559767 NA coding protein psRNATarget
HI406713.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:184   UUCCAUUUUAGUCCCUAAAUUACU   207

1.5 Sequence 4838 from Patent EP2074227 NA coding protein psRNATarget
LQ238843.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:184   UUCCAUUUUAGUCCCUAAAUUACU   207

1.5 Sequence 4838 from Patent EP2985353 NA coding protein psRNATarget
JB166880.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:93   UUCCAUUUUAGUCCCUAAAUUACU   116

1.5 Sequence 4544 from Patent EP2559767 NA coding protein psRNATarget
LQ238549.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:93   UUCCAUUUUAGUCCCUAAAUUACU   116

1.5 Sequence 4544 from Patent EP2985353 NA coding protein psRNATarget
HI406419.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:93   UUCCAUUUUAGUCCCUAAAUUACU   116

1.5 Sequence 4544 from Patent EP2074227 NA coding protein psRNATarget
JB163812.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1476 from Patent EP2559767 NA coding protein psRNATarget
HI403351.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1476 from Patent EP2074227 NA coding protein psRNATarget
LQ235481.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1476 from Patent EP2985353 NA coding protein psRNATarget
LQ235400.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1395 from Patent EP2985353 NA coding protein psRNATarget
JB163824.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1488 from Patent EP2559767 NA coding protein psRNATarget
HI403360.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1485 from Patent EP2074227 NA coding protein psRNATarget
HI403363.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1488 from Patent EP2074227 NA coding protein psRNATarget
HI403419.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1544 from Patent EP2074227 NA coding protein psRNATarget
JB163832.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1496 from Patent EP2559767 NA coding protein psRNATarget
HI403309.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1434 from Patent EP2074227 NA coding protein psRNATarget
JB163909.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1573 from Patent EP2559767 NA coding protein psRNATarget
JB163731.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1395 from Patent EP2559767 NA coding protein psRNATarget
HI403371.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1496 from Patent EP2074227 NA coding protein psRNATarget
LQ235549.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1544 from Patent EP2985353 NA coding protein psRNATarget
JB163821.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1485 from Patent EP2559767 NA coding protein psRNATarget
LQ235533.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1528 from Patent EP2985353 NA coding protein psRNATarget
LQ235578.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1573 from Patent EP2985353 NA coding protein psRNATarget
LQ235561.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1556 from Patent EP2985353 NA coding protein psRNATarget
LQ235490.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1485 from Patent EP2985353 NA coding protein psRNATarget
LQ235493.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1488 from Patent EP2985353 NA coding protein psRNATarget
LQ235501.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1496 from Patent EP2985353 NA coding protein psRNATarget
HI403431.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1556 from Patent EP2074227 NA coding protein psRNATarget
JB163892.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1556 from Patent EP2559767 NA coding protein psRNATarget
JB163864.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1528 from Patent EP2559767 NA coding protein psRNATarget
JB163770.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1434 from Patent EP2559767 NA coding protein psRNATarget
HI403403.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1528 from Patent EP2074227 NA coding protein psRNATarget
HI403448.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1573 from Patent EP2074227 NA coding protein psRNATarget
HI403270.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1395 from Patent EP2074227 NA coding protein psRNATarget
LQ235439.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1434 from Patent EP2985353 NA coding protein psRNATarget
JB163880.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1544 from Patent EP2559767 NA coding protein psRNATarget
LQ235536.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:9   UUCCAUUUUAGUCCCUAAAUUACU   32

1.5 Sequence 1531 from Patent EP2985353 NA coding protein psRNATarget
HI403406.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:9   UUCCAUUUUAGUCCCUAAAUUACU   32

1.5 Sequence 1531 from Patent EP2074227 NA coding protein psRNATarget
JB163867.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:9   UUCCAUUUUAGUCCCUAAAUUACU   32

1.5 Sequence 1531 from Patent EP2559767 NA coding protein psRNATarget
LQ235395.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1390 from Patent EP2985353 NA coding protein psRNATarget
JB163726.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1390 from Patent EP2559767 NA coding protein psRNATarget
HI403265.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1390 from Patent EP2074227 NA coding protein psRNATarget
JB163878.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1542 from Patent EP2559767 NA coding protein psRNATarget
LQ235572.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1567 from Patent EP2985353 NA coding protein psRNATarget
LQ235547.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1542 from Patent EP2985353 NA coding protein psRNATarget
HI403442.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1567 from Patent EP2074227 NA coding protein psRNATarget
JB163903.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1567 from Patent EP2559767 NA coding protein psRNATarget
HI403417.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  ||||||||||||||||||*|||||
targets:10   UUCCAUUUUAGUCCCUAAAUUACU   33

1.5 Sequence 1542 from Patent EP2074227 NA coding protein psRNATarget
BT085047.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  |||=||||||||||||||*|||||
targets:1235   UUCUAUUUUAGUCCCUAAAUUACU   1258

1.5 Zea mays full-length cDNA clone ZM_BFb0232J05 mRNA, complete cds NA coding protein psRNATarget
HI403393.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  *|||||||||||||||||*||||*
targets:10   CUCCAUUUUAGUCCCUAAAUUACA   33

2.5 Sequence 1518 from Patent EP2074227 NA coding protein psRNATarget
LQ235523.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  *|||||||||||||||||*||||*
targets:10   CUCCAUUUUAGUCCCUAAAUUACA   33

2.5 Sequence 1518 from Patent EP2985353 NA coding protein psRNATarget
JB163854.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  *|||||||||||||||||*||||*
targets:10   CUCCAUUUUAGUCCCUAAAUUACA   33

2.5 Sequence 1518 from Patent EP2559767 NA coding protein psRNATarget
HI403330.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  |||==|||||||||||||*||||*
targets:10   UUCUGUUUUAGUCCCUAAAUUACC   33

2.5 Sequence 1455 from Patent EP2074227 NA coding protein psRNATarget
LQ235460.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  |||==|||||||||||||*||||*
targets:10   UUCUGUUUUAGUCCCUAAAUUACC   33

2.5 Sequence 1455 from Patent EP2985353 NA coding protein psRNATarget
JB163791.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  |||==|||||||||||||*||||*
targets:10   UUCUGUUUUAGUCCCUAAAUUACC   33

2.5 Sequence 1455 from Patent EP2559767 NA coding protein psRNATarget
EU946945.1
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  |||*||||||||||||||*||||*
targets:611   UUCAAUUUUAGUCCCUAAAUUACC   634

2.5 Zea mays clone 325236 mRNA sequence NA coding protein psRNATarget
BT066057.2
ncRNA:24   AAGGUAAAAUCAGGGAUUAAAUGA   1
  *||=*|||||||||||||*|||||
targets:810   CUCUUUUUUAGUCCCUAAAUUACU   833

1.5 Zea mays full-length cDNA clone ZM_BFb0211I17 mRNA, complete cds NA coding protein psRNATarget
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