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BaseInfo

ncRNA ID osa-miR5789
Species Oryza sativa
Class miRNA
Genome position Chr6:1801934-1801998 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - UGACUGAGCUUCGUUCGGUAU - 26
Stem-loop(if miRNA)     C     A       ACGA     -    A
AAUU AUACC AAUGGAG    UCAGU ACCA A
|||| ||||| |||||||    ||||| |||| G
UUAG UAUGG UUGCUUC    AGUCA UGGU G
    C     C       ---G     G    C
Stem-loop sequence AAUUCAUACCAAAUGGAGACGAUCAGUACCAAAGGCUGGUGACUGAGCUUCGUUCGGUAUCGAUU

Reference

1 PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage";
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ;
Plant Cell. 23:4185-4207(2011).