ncRNA ID | novel_zma_miR1891 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:79629137-79629254 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089715;SRR5451003;SRR2089700;SRR2089703;SRR2089706 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUCCUCUGCAGAGGCGCGGACGG - 24 |
Stem-loop(if miRNA) |
--     --    CAG          G    GC    -AG    -C   CA   C  GA       UGUCC  UCUG   AGGCGCGGAC GUCC  GGCC   GGGC  GGA  GUC GC  CCUGG   |||||  ||||   |||||||||| ||||  ||||   ||||  |||  ||| ||  ||||U   ACAGG  GGAC   UCCGCGCCUG CAGG  CCGG   UCCG  CCU  CGG CG  GGACA UG     CC    --A          G    --    CAG    UC   UG   U  -G     |
Stem-loop sequence | UGUCCUCUGCAGAGGCGCGGACGGUCCGCGGCCAGGGGCCGGACAGUCCGCGACCUGGUACAGGGGCUGGCGUUCCCUGCCUGACGGCCGGACGGUCCGCGCCUACAGGCCGGACAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ056906.1 |
|
2.5 | TSA: Zea mays contig58028, mRNA sequence | NA | coding protein | psRNATarget |