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BaseInfo

ncRNA ID novel_zma_miR1891
Species Zea mays
Class miRNA
Genome position Chr7:79629137-79629254 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089715;SRR5451003;SRR2089700;SRR2089703;SRR2089706
Length 24
Mature sequence(if miRNA) 1 - UGUCCUCUGCAGAGGCGCGGACGG - 24
Stem-loop(if miRNA) --     --    CAG          G    GC    -AG    -C   CA   C  GA    
  UGUCC  UCUG   AGGCGCGGAC GUCC  GGCC   GGGC  GGA  GUC GC  CCUGG
  |||||  ||||   |||||||||| ||||  ||||   ||||  |||  ||| ||  ||||U
  ACAGG  GGAC   UCCGCGCCUG CAGG  CCGG   UCCG  CCU  CGG CG  GGACA
UG     CC    --A          G    --    CAG    UC   UG   U  -G    
Stem-loop sequence UGUCCUCUGCAGAGGCGCGGACGGUCCGCGGCCAGGGGCCGGACAGUCCGCGACCUGGUACAGGGGCUGGCGUUCCCUGCCUGACGGCCGGACGGUCCGCGCCUACAGGCCGGACAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ056906.1
ncRNA:24   GGCAGGCGCGGAGACGUCUCCUGU   1
  **||||||*||||||||||*||||
targets:207   AGGUCCGCCCCUCUGCAGAUGACA   230

2.5 TSA: Zea mays contig58028, mRNA sequence NA coding protein psRNATarget