ncRNA ID | novel_zma_miR1881 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:10943471-10943525 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGGGUUCGGGAUUCGGGUAUCGGG - 24 |
Stem-loop(if miRNA) |
--      C      C   U  C    U   CGGGUU GGGAUU GGG AU GGGU U   |||||| |||||| ||| || |||| U   GCCCGA UCUUGA UCC UG CCCG C UU      C      -   -  A    U |
Stem-loop sequence | CGGGUUCGGGAUUCGGGUAUCGGGUUUUCUGCCCAGUCCUAGUUCUCAGCCCGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT085051.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0234H18 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_008645533.2 |
|
1.5 | PREDICTED: Zea mays expp1 protein (LOC100283623), transcript variant X1, mRNA | NA | coding protein | psRNATarget |