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BaseInfo

ncRNA ID novel_zma_miR1876
Species Zea mays
Class miRNA
Genome position Chr7:97878660-97878710 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089714;SRR2287031;SRR2287165;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - ACAUGAUGUAGAAUGAUAUAGGUU - 24
Stem-loop(if miRNA) --    C                  
  CCUA AUUAUUUUACAUCAUGUGA
  |||| ||||||||||||||||||U
  GGAU UAGUAAGAUGUAGUACAUU
UU    A                  
Stem-loop sequence CCUACAUUAUUUUACAUCAUGUGAUUUACAUGAUGUAGAAUGAUAUAGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU950947.1
ncRNA:24   UUGGAUAUAGUAAGAUGUAGUACA   1
  =|||-|*||||*||||||||||||
targets:716   GACC-AGAUCAGUCUACAUCAUGU   738

2.5 Zea mays clone 676949 mRNA sequence NA coding protein psRNATarget
AY111329.1
ncRNA:24   UUGGAUAUAGUAAGAUGUAGUACA   1
  ==||*||*|*||||||||||||||
targets:163   GGCCCAUCUGAUUCUACAUCAUGU   186

2.0 Zea mays CL2765_1 mRNA sequence NA coding protein psRNATarget