ncRNA ID | novel_zma_miR1860 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:87986082-87986302 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR1583941;SRR1583942 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CCCCGUCUCAUGAUAUCACAUG - 22 |
Stem-loop(if miRNA) |
--      C                                                                    A                 A     CA      CA   CCCCGU UCAUGAUAUCACAUGUAUAGGCUGUGAUAAAAAUUUUAGAGUAUUUGGAGAAAGUUGUGAGACACUAU UGUAGAAACCUAAGAGG CUACA  UGAAAU  U   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||   GGGGCA AGUACUAUAGUGUACAUAUCCGACACUAUUUUUAAAAUCUCAUAAACCUCUUUCAACACUCUGUGAUA ACAUCUUUGGAUUCUCU GGUGU  AUUUUG  A CA      C                                                                    C                 A     -A      AG |
Stem-loop sequence | CCCCGUCUCAUGAUAUCACAUGUAUAGGCUGUGAUAAAAAUUUUAGAGUAUUUGGAGAAAGUUGUGAGACACUAUAUGUAGAAACCUAAGAGGACUACACAUGAAAUCAUAGAGUUUUAAUGUGGAUCUCUUAGGUUUCUACACAUAGUGUCUCACAACUUUCUCCAAAUACUCUAAAAUUUUUAUCACAGCCUAUACAUGUGAUAUCAUGACACGGGGAC |