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BaseInfo

ncRNA ID novel_zma_miR1860
Species Zea mays
Class miRNA
Genome position Chr10:87986082-87986302 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR1583941;SRR1583942
Length 22
Mature sequence(if miRNA) 1 - CCCCGUCUCAUGAUAUCACAUG - 22
Stem-loop(if miRNA) --      C                                                                    A                 A     CA      CA
  CCCCGU UCAUGAUAUCACAUGUAUAGGCUGUGAUAAAAAUUUUAGAGUAUUUGGAGAAAGUUGUGAGACACUAU UGUAGAAACCUAAGAGG CUACA  UGAAAU  U
  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||
  GGGGCA AGUACUAUAGUGUACAUAUCCGACACUAUUUUUAAAAUCUCAUAAACCUCUUUCAACACUCUGUGAUA ACAUCUUUGGAUUCUCU GGUGU  AUUUUG  A
CA      C                                                                    C                 A     -A      AG
Stem-loop sequence CCCCGUCUCAUGAUAUCACAUGUAUAGGCUGUGAUAAAAAUUUUAGAGUAUUUGGAGAAAGUUGUGAGACACUAUAUGUAGAAACCUAAGAGGACUACACAUGAAAUCAUAGAGUUUUAAUGUGGAUCUCUUAGGUUUCUACACAUAGUGUCUCACAACUUUCUCCAAAUACUCUAAAAUUUUUAUCACAGCCUAUACAUGUGAUAUCAUGACACGGGGAC