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BaseInfo

ncRNA ID novel_zma_miR1858
Species Zea mays
Class miRNA
Genome position Chr7:179905168-179905245 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089705
Length 24
Mature sequence(if miRNA) 1 - ACAAAUAAAACGAAACGGAGGGAG - 24
Stem-loop(if miRNA) --           U     G    C          U  A
  CCCUCUGUUUC UUUUA UUGU GCUGGAUAGU CA U
  ||||||||||| ||||| |||| |||||||||| ||
  GGGAGGCAAAG AAAAU AACA CGACCUAUUA GU U
GA           C     A    A          C  U
Stem-loop sequence CCCUCUGUUUCUUUUUAGUUGUCGCUGGAUAGUUCAAUUUUGCAUUAUCCAGCAACAAAUAAAACGAAACGGAGGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409234.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:5   CUCCCUCCGUUUCGUUUUAGUUGU   28

1.5 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
JB169695.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:5   CUCCCUCCGUUUCGUUUUAGUUGU   28

1.5 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
HI409615.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
LQ241745.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
LQ241364.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:5   CUCCCUCCGUUUCGUUUUAGUUGU   28

1.5 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
HI409699.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ240748.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
JB169789.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
JB170657.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
JB169406.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI409328.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB170077.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
HI408710.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
HI408618.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170160.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI408570.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ239399.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5394 from Patent EP2985353 NA coding protein psRNATarget
JB167730.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5394 from Patent EP2559767 NA coding protein psRNATarget
HI407269.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5394 from Patent EP2074227 NA coding protein psRNATarget
JB167785.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
HI407324.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
JB167672.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5336 from Patent EP2559767 NA coding protein psRNATarget
HI407211.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5336 from Patent EP2074227 NA coding protein psRNATarget
LQ239341.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5336 from Patent EP2985353 NA coding protein psRNATarget
HI407305.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
HI407230.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB167691.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
JB167766.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

1.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
HI403294.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
JB163755.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
JB163817.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
HI403356.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
HI403279.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
HI403369.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
LQ235486.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
JB163830.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
JB163740.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36

1.5 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
EU964901.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:499   CUCCCUCCGUUUCUUUUUAUUUGU   522

1.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
BT062468.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:573   CUCCCUCCGUUUCGUUUUAGUUGU   596

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:571   CUCCCUCCGUUUCUUUUUAUUUGU   594

1.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:571   CUCCCUCCGUUUCUUUUUAUUUGU   594

1.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT055583.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:837   CUCCCUCCGUUUCGUUUUAGUUGU   860

1.5 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
NM_001153043.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:837   CUCCCUCCGUUUCGUUUUAGUUGU   860

1.5 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:232   CUCCCUCCGUUUCUUUUUAUUUGU   255

1.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1026   CUCCCUCCGUUUCGUUUUAGUUGU   1049

1.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:914   CUCCCUCCGUUUCGUUUUAGUUGU   937

1.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1168   CUCCCUCCGUUUCUUUUUAUUUGU   1191

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1290   CUCCCUCCGUUUCUUUUUAUUUGU   1313

1.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1290   CUCCCUCCGUUUCUUUUUAUUUGU   1313

1.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:143   CUCCCUCCGUUUCUUUUUAUUUGU   166

1.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1164   CUCCCUCCGUUUCGUUUUAGUUGU   1187

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1274   CUCCCUCCGUUUCUUUUUAUUUGU   1297

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549872.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1267   CUCCCUCCGUUUCGUUUUAGUUGU   1290

1.5 PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001175582.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1434   CUCCCUCCGUUUCGUUUUAGUUGU   1457

1.5 Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA NA coding protein psRNATarget
BT065656.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1434   CUCCCUCCGUUUCGUUUUAGUUGU   1457

1.5 Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1517   CUCCCUCCGUUUCGUUUUAGUUGU   1540

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||||||||*||||
targets:1517   CUCCCUCCGUUUCGUUUUAGUUGU   1540

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1529   CUCCCUCCGUUUCUUUUUAUUUGU   1552

1.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1545   CUCCCUCCGUUUCUUUUUAUUUGU   1568

1.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:2437   CUCCCUCCGUUUCUUUUUAUUUGU   2460

1.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:1465   CUCCCUCCGUUUCUUUUUAUUUGU   1488

1.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:2798   CUCCCUCCGUUUCUUUUUAUUUGU   2821

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:2815   CUCCCUCCGUUUCUUUUUAUUUGU   2838

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:2921   CUCCCUCCGUUUCUUUUUAUUUGU   2944

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||||||||*||||||||||
targets:3700   CUCCCUCCGUUUCUUUUUAUUUGU   3723

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
LQ242181.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||||||=||||||||||||*||||
targets:3   CUCCCUUCGUUUCGUUUUAGUUGU   26

2.5 Sequence 8176 from Patent EP2985353 NA coding protein psRNATarget
LQ241224.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:3   CUCCCUCUGUUUCUUUUUAUUUGU   26

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
JB169555.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:3   CUCCCUCUGUUUCUUUUUAUUUGU   26

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
HI409094.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:3   CUCCCUCUGUUUCUUUUUAUUUGU   26

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
HI410051.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||||||=||||||||||||*||||
targets:3   CUCCCUUCGUUUCGUUUUAGUUGU   26

2.5 Sequence 8176 from Patent EP2074227 NA coding protein psRNATarget
JB170512.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||||||=||||||||||||*||||
targets:3   CUCCCUUCGUUUCGUUUUAGUUGU   26

2.5 Sequence 8176 from Patent EP2559767 NA coding protein psRNATarget
LQ240984.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||*||||||||||
targets:3   CUCUCUCCGUUUCUUUUUAUUUGU   26

1.5 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||*||||||||||
targets:3   CUCUCUCCGUUUCUUUUUAUUUGU   26

1.5 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||*||||||||||
targets:3   CUCUCUCCGUUUCUUUUUAUUUGU   26

1.5 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
HI410015.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:6   CUCCCUCUGUUUCUUUUUAUUUGU   29

2.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:6   CUCCCUCUGUUUCUUUUUAUUUGU   29

2.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB170476.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:6   CUCCCUCUGUUUCUUUUUAUUUGU   29

2.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
JB170060.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||*||||||||||
targets:6   CUCUCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
LQ241729.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||*||||||||||
targets:6   CUCUCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
HI409599.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||*||||||||||
targets:6   CUCUCUCCGUUUCUUUUUAUUUGU   29

1.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
EZ065373.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||||=||||||||||||||*||||
targets:280   CUCCUUCCGUUUCGUUUUAGUUGU   303

1.5 TSA: Zea mays contig01006, mRNA sequence NA coding protein psRNATarget
BT068381.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1111   CUCCCUCUGUUUCUUUUUAUUUGU   1134

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1064   CUCCCUCUGUUUCUUUUUAUUUGU   1087

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1170   CUCCCUCUGUUUCUUUUUAUUUGU   1193

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU945792.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||=||||||||||||||||*||||
targets:1180   CUUCCUCCGUUUCGUUUUAGUUGU   1203

1.5 Zea mays clone 285684 mRNA sequence NA coding protein psRNATarget
BT088158.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1204   CUCCCUCUGUUUCUUUUUAUUUGU   1227

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
EU964554.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||=||||||||||||||||*||||
targets:1329   CUUCCUCCGUUUCGUUUUAGUUGU   1352

1.5 Zea mays clone 279840 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1223   CUCCCUCUGUUUCUUUUUAUUUGU   1246

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||=||||||||||*||||||||||
targets:1357   CUUCCUCCGUUUCUUUUUAUUUGU   1380

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1404   CUCCCUCUGUUUCUUUUUAUUUGU   1427

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1404   CUCCCUCUGUUUCUUUUUAUUUGU   1427

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:1268   CUCCCUCUGUUUCUUUUUAUUUGU   1291

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||*||||||||||
targets:2002   CUCCCUCUGUUUCUUUUUAUUUGU   2025

2.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
EU971439.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||||||||*||||
targets:2115   CUCUCUCCGUUUCGUUUUAGUUGU   2138

1.5 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=|||||||||||||||*||||
targets:2115   CUCUCUCCGUUUCGUUUUAGUUGU   2138

1.5 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||=||||||||||*||||||||||
targets:2498   CUUCCUCCGUUUCUUUUUAUUUGU   2521

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||||||=|||||||||||*||||
targets:2530   CUCCCUCUGUUUCGUUUUAGUUGU   2553

2.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008667486.2
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  ||=|=||||||||||||||*||||
targets:1335   CUUCUUCCGUUUCGUUUUAGUUGU   1358

1.5 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
EZ080914.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||*|||||||||||||||*||||
targets:110   CUCACUCCGUUUCGUUUUAAUUGU   133

1.5 TSA: Zea mays contig16553, mRNA sequence NA coding protein psRNATarget
EU943455.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:191   ACCCCUCCGUUUCUUUUUAUUUGU   214

1.5 Zea mays clone 1624294 mRNA sequence NA coding protein psRNATarget
EU975941.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:551   ACCCCUCCGUUUCUUUUUAUUUGU   574

1.5 Zea mays clone 506054 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU968632.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:560   ACCCCUCCGUUUCUUUUUAUUUGU   583

1.5 Zea mays clone 322947 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
NM_001349993.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:557   ACCCCUCCGUUUCUUUUUAUUUGU   580

1.5 Zea mays oleosin 16 kDa (oleosin), mRNA NA coding protein psRNATarget
EU952246.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:557   ACCCCUCCGUUUCUUUUUAUUUGU   580

1.5 Zea mays clone 1272655 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU976836.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:556   ACCCCUCCGUUUCUUUUUAUUUGU   579

1.5 Zea mays clone 991472 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU952863.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  **|||||||||||*||||||||||
targets:558   ACCCCUCCGUUUCUUUUUAUUUGU   581

1.5 Zea mays clone 1291487 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EZ061437.1
ncRNA:24   GAGGGAGGCAAAGCAAAAUAAACA   1
  |||=||||*||||*||||||||||
targets:170   CUCUCUCCAUUUCUUUUUAUUUGU   193

2.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
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