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BaseInfo

ncRNA ID	novel_zma_miR1849
Species	Zea mays
Class	miRNA
Genome position	Chr7:11944123-11944172 [+]
Reference genome	RefGen_v4
Source	SRR2089711
Length	24
Mature sequence(if miRNA)	1 - UUUAGUCACUGGAACUAAACGGGG - 24
Stem-loop(if miRNA)	--          -- GA     AC  G   UUUAGUCACU  G  ACUAA  GG G   ||||||||||  |  |||||  ||   AAAUCAGUGG  C  UGAUU  CC C GG          AG AG     --  A
Stem-loop sequence	UUUAGUCACUGGAACUAAACGGGGCACCUUAGUGACGAGGUGACUAAAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672208.2	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   |=||||||=||||=|||||||||| targets:1400   CUCCGUUUGGUUCUAGUGACUAAA   1423 Target Full Sequence	2.5	PREDICTED: Zea mays anthocyanidin 5,3-O-glucosyltransferase (LOC103647700), mRNA	NA	coding protein	psRNATarget
XM_008651239.2	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   =*||||||=|||||=||||||||| targets:1838   UACCGUUUGGUUCCGGUGACUAAA   1861 Target Full Sequence	2.5	PREDICTED: Zea mays serine carboxypeptidase 2 (LOC103630156), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008651238.2	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   =*||||||=|||||=||||||||| targets:1841   UACCGUUUGGUUCCGGUGACUAAA   1864 Target Full Sequence	2.5	PREDICTED: Zea mays serine carboxypeptidase 2 (LOC103630156), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548136.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   ***=||||||||||||*||||||| targets:4072   GGAUGUUUAGUUCCAGAGACUAAA   4095 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943957), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548139.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   ***=||||||||||||*||||||| targets:4084   GGAUGUUUAGUUCCAGAGACUAAA   4107 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943957), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020548140.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   ***=||||||||||||*||||||| targets:4099   GGAUGUUUAGUUCCAGAGACUAAA   4122 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943957), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020548138.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   ***=||||||||||||*||||||| targets:4285   GGAUGUUUAGUUCCAGAGACUAAA   4308 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943957), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020548137.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   ***=||||||||||||*||||||| targets:4389   GGAUGUUUAGUUCCAGAGACUAAA   4412 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943957), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020548135.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   ***=||||||||||||*||||||| targets:4389   GGAUGUUUAGUUCCAGAGACUAAA   4412 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943957), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008656613.2	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   |**=||||=|||||||*||||||| targets:1896   CAAUGUUUGGUUCCAGAGACUAAA   1919 Target Full Sequence	2.5	PREDICTED: Zea mays Protein binding protein (LOC100279902), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001152854.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   |**=||||=|||||||*||||||| targets:2702   CAAUGUUUGGUUCCAGAGACUAAA   2725 Target Full Sequence	2.5	Zea mays Protein binding protein (LOC100279902), mRNA	NA	coding protein	psRNATarget
BT055090.1	ncRNA:24   GGGGCAAAUCAAGGUCACUGAUUU   1   |**=||||=|||||||*||||||| targets:2702   CAAUGUUUGGUUCCAGAGACUAAA   2725 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0213O07 mRNA, complete cds	NA	coding protein	psRNATarget