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BaseInfo

ncRNA ID novel_zma_miR1834
Species Zea mays
Class miRNA
Genome position Chr6:74955453-74955505 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089713;SRR2089714;SRR2089715;SRR2089699;SRR2089701;SRR2089703;SRR2089706;SRR2089708
Length 24
Mature sequence(if miRNA) 30 - AGAAGGUGGGACGAGAAUGGGCUG - 53
Stem-loop(if miRNA) --     --   -       CU      G
  GCCUA  CUC UCCCACU  UUCUGU C
  |||||  ||| |||||||  ||||||
  CGGGU  GAG AGGGUGG  AAGACG U
GU     AA   C       --      C
Stem-loop sequence GCCUACUCUCCCACUCUUUCUGUGCUCGCAGAAGGUGGGACGAGAAUGGGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944746.1
ncRNA:24   GUCGGGUAAGAGCAGGGUGGAAGA   1
  ||*|*|||||*|||||||||||||
targets:29   CAACACAUUCCCGUCCCACCUUCU   52

1.0 Zea mays clone 228825 mRNA sequence NA coding protein psRNATarget
EU940973.1
ncRNA:24   GUCGGGUAAGAGCAGGGUGGAAGA   1
  ||*|*|||||*|||||||||||||
targets:1552   CAACACAUUCCCGUCCCACCUUCU   1575

1.0 Zea mays clone 1225229 mRNA sequence NA coding protein psRNATarget
EU950647.1
ncRNA:24   GUCGGGUAAGAGCAGGGUGGAAGA   1
  ||*|*|||||*|||||||=|||||
targets:29   CAACACAUUCCCGUCCCAUCUUCU   52

2.5 Zea mays clone 505758 mRNA sequence NA coding protein psRNATarget