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BaseInfo

ncRNA ID	novel_zma_miR1828
Species	Zea mays
Class	miRNA
Genome position	Chr3:120023368-120023423 [-]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647390;SRR2647391
Length	24
Mature sequence(if miRNA)	1 - AUUCUACCUCCAAAUUCAGGGCGU - 24
Stem-loop(if miRNA)	--    -        U  GG   AAGAA   GCCC GAAUUUGG GG  GAA     G   |||| |||||||| ||  |||     G   CGGG CUUAAACC CC  CUU     A UG    A        U  AU   AAAAA
Stem-loop sequence	GCCCGAAUUUGGUGGGGGAAAAGAAGGAAAAAAUUCUACCUCCAAAUUCAGGGCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654188.2	ncRNA:24   UGCGGGACUUAAACCUCCAUCUUA   1   |||||||||||||||=|||||||| targets:1168   ACGCCCUGAAUUUGGGGGUAGAAU   1191 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103632369 (LOC103632369), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654189.2	ncRNA:24   UGCGGGACUUAAACCUCCAUCUUA   1   |||||||||||||||=|||||||| targets:1388   ACGCCCUGAAUUUGGGGGUAGAAU   1411 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103632369 (LOC103632369), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001158606.1	ncRNA:24   UGCGGGACUUAAACCUCCAUCUUA   1   ***|=|||||||||||||*||||* targets:91   UAUCUCUGAAUUUGGAGGCAGAAC   114 Target Full Sequence	2.5	Zea mays small heat shock-like protein (LOC100285715), mRNA	NA	coding protein	psRNATarget
EU973550.1	ncRNA:24   UGCGGGACUUAAACCUCCAUCUUA   1   ***|=|||||||||||||*||||* targets:91   UAUCUCUGAAUUUGGAGGCAGAAC   114 Target Full Sequence	2.5	Zea mays clone 400833 small heat shock-like protein mRNA, complete cds	NA	coding protein	psRNATarget