Search result

BaseInfo

ncRNA ID novel_zma_miR1827
Species Zea mays
Class miRNA
Genome position Chr5:147252597-147252776 [-]
Reference genome RefGen_v4
Source SRR1583941;SRR2647386
Length 22
Mature sequence(if miRNA) 1 - CUAGACUUCGGUUUUUACCGCU - 22
Stem-loop(if miRNA) --      C    AU  U    -   A   -      ----  G  AAGG UA     -   AGC        U  G  UUU       A CA     
  CGGUGG GACC  GG GUCU GCC CAG UGCCUG    GG CG    G  GCGCC CCC   GCUGGCGG GA AU   GGCGCUC C  UCGUUG
  |||||| ||||  || |||| ||| ||| ||||||    || ||    |  ||||| |||   |||||||| || ||   ||||||| |  |||||A
  GCCAUU UUGG  CU CAGA CGG GUU AUGGAC    UC GC    C  UGCGG GGG   CGGCCGCC CU UG   UUGCGGG G  AGCAGA
UC      U    --  U    U   -   G      UGAG  G  --GA GC     A   AGU        -  G  ---       C -A     
Stem-loop sequence CGGUGGCGACCAUGGUGUCUGCCACAGUGCCUGGGGCGAAGGGUAGCGCCCCCAGCGCUGGCGGUGAGAUUUUGGCGCUCACCAUCGUUGAAGACGAAGCGGGCGUUGUGUCCCGCCGGCUGAGGGAGGCGUCGCAGCGGCUGAGUCAGGUAGUUGGGCUAGACUUCGGUUUUUACCGCU