ncRNA ID | novel_zma_miR1827 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:147252597-147252776 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941;SRR2647386 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CUAGACUUCGGUUUUUACCGCU - 22 |
Stem-loop(if miRNA) |
--      C    AU  U    -   A   -      ----  G  AAGG UA     -   AGC        U  G  UUU       A CA        CGGUGG GACC  GG GUCU GCC CAG UGCCUG    GG CG    G  GCGCC CCC   GCUGGCGG GA AU   GGCGCUC C  UCGUUG   |||||| ||||  || |||| ||| ||| ||||||    || ||    |  ||||| |||   |||||||| || ||   ||||||| |  |||||A   GCCAUU UUGG  CU CAGA CGG GUU AUGGAC    UC GC    C  UGCGG GGG   CGGCCGCC CU UG   UUGCGGG G  AGCAGA UC      U    --  U    U   -   G      UGAG  G  --GA GC     A   AGU        -  G  ---       C -A      |
Stem-loop sequence | CGGUGGCGACCAUGGUGUCUGCCACAGUGCCUGGGGCGAAGGGUAGCGCCCCCAGCGCUGGCGGUGAGAUUUUGGCGCUCACCAUCGUUGAAGACGAAGCGGGCGUUGUGUCCCGCCGGCUGAGGGAGGCGUCGCAGCGGCUGAGUCAGGUAGUUGGGCUAGACUUCGGUUUUUACCGCU |