Search result

BaseInfo

ncRNA ID novel_zma_miR1824
Species Zea mays
Class miRNA
Genome position Chr6:92810449-92810563 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089712;SRR5451003;SRR5451005;SRR1997866;SRR2089698;SRR2089700;SRR2089701;SRR2089704;SRR2089705;SRR2089706
Length 22
Mature sequence(if miRNA) 1 - UAGACACAGAUGGACCCUACAA - 22
Stem-loop(if miRNA) --   -U                        U          ---  -AAUU       C
  GUG  GUCCAUCUGUGUCUAUGAAAUGUG GGGUCUGAUG   GC     UUACAAA A
  |||  |||||||||||||||||||||||| ||||||||||   ||     ||||||| C
  CAU  CAGGUAGACACAGAUACUUUAUAU CUUAGACUAU   CG     GGUGUUU G
AA   CC                        -          AAA  GUAGU       U
Stem-loop sequence GUGUGUCCAUCUGUGUCUAUGAAAUGUGUGGGUCUGAUGGCAAUUUUACAAACACGUUUUGUGGUGAUGGCAAAUAUCAGAUUCUAUAUUUCAUAGACACAGAUGGACCCUACAA