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BaseInfo

ncRNA ID novel_zma_miR1811
Species Zea mays
Class miRNA
Genome position Chr6:147447239-147447354 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 24
Mature sequence(if miRNA) 1 - ACCGGACUGUCCGGUGUACACCGC - 24
Stem-loop(if miRNA) --       C        U        -------CACCA   - ACUCAAACUUCAAACUCGU
  GGUGUGC ACCGGACA GUCCGGUG            GAG G                   C
  ||||||| |||||||| ||||||||            ||| |
  CCACAUG UGGCCUGU CAGGCCAC            CAG G                   A
CG       -        -        UUAAUAUCGCCU   C GAGACCUUAAAGGGCUUCC
Stem-loop sequence GGUGUGCCACCGGACAUGUCCGGUGCACCAGAGGACUCAAACUUCAAACUCGUCACCUUCGGGAAAUUCCAGAGGCGACUCCGCUAUAAUUCACCGGACUGUCCGGUGUACACCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169812.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||||||||||
targets:29   CCGGUGUACACCGGACAGUCCGGU   52

0.0 Sequence 7476 from Patent EP2559767 NA coding protein psRNATarget
LQ241481.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||||||||||
targets:29   CCGGUGUACACCGGACAGUCCGGU   52

0.0 Sequence 7476 from Patent EP2985353 NA coding protein psRNATarget
HI409351.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||||||||||
targets:29   CCGGUGUACACCGGACAGUCCGGU   52

0.0 Sequence 7476 from Patent EP2074227 NA coding protein psRNATarget
EU950973.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||||||||||
targets:181   CCGGUGUGCACCGGACAGUCCGGU   204

1.0 Zea mays clone 677173 mRNA sequence NA coding protein psRNATarget
LQ241238.1
ncRNA:24   CGCCACAUGUGGCCUGU-CAGGCCA   1
  *||||||||||||||||-|||||||
targets:10   CCGGUGUACACCGGACAUGUCCGGU   34

3.0 Sequence 7233 from Patent EP2985353 NA coding protein psRNATarget
HI409108.1
ncRNA:24   CGCCACAUGUGGCCUGU-CAGGCCA   1
  *||||||||||||||||-|||||||
targets:10   CCGGUGUACACCGGACAUGUCCGGU   34

3.0 Sequence 7233 from Patent EP2074227 NA coding protein psRNATarget
JB169569.1
ncRNA:24   CGCCACAUGUGGCCUGU-CAGGCCA   1
  *||||||||||||||||-|||||||
targets:10   CCGGUGUACACCGGACAUGUCCGGU   34

3.0 Sequence 7233 from Patent EP2559767 NA coding protein psRNATarget
EU948808.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:523   CCGGUGUACACCGGACUGUCCGGU   546

1.5 Zea mays clone 385792 mRNA sequence NA coding protein psRNATarget
EU948808.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:767   CCGGUGUGCACCGGACUGUCCGGU   790

2.5 Zea mays clone 385792 mRNA sequence NA coding protein psRNATarget
NM_001176828.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:719   CCGGUGUACACCGGACUGUCCGGU   742

1.5 Zea mays uncharacterized LOC100384263 (LOC100384263), mRNA NA coding protein psRNATarget
BT069634.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:719   CCGGUGUACACCGGACUGUCCGGU   742

1.5 Zea mays full-length cDNA clone ZM_BFb0193J19 mRNA, complete cds NA coding protein psRNATarget
NM_001176839.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1509   CCGGUGUGCACCGGACUGUCCGGU   1532

2.5 Zea mays uncharacterized LOC100384275 (LOC100384275), mRNA NA coding protein psRNATarget
NM_001176839.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1753   CCGGUGUGCACCGGACUGUCCGGU   1776

2.5 Zea mays uncharacterized LOC100384275 (LOC100384275), mRNA NA coding protein psRNATarget
BT069667.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1509   CCGGUGUGCACCGGACUGUCCGGU   1532

2.5 Zea mays full-length cDNA clone ZM_BFb0206D24 mRNA, complete cds NA coding protein psRNATarget
BT069667.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1753   CCGGUGUGCACCGGACUGUCCGGU   1776

2.5 Zea mays full-length cDNA clone ZM_BFb0206D24 mRNA, complete cds NA coding protein psRNATarget
HI410048.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:108   CCGGUGCACACCGGACAGUCCGGU   131

1.0 Sequence 8173 from Patent EP2074227 NA coding protein psRNATarget
JB170509.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:108   CCGGUGCACACCGGACAGUCCGGU   131

1.0 Sequence 8173 from Patent EP2559767 NA coding protein psRNATarget
LQ242178.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:108   CCGGUGCACACCGGACAGUCCGGU   131

1.0 Sequence 8173 from Patent EP2985353 NA coding protein psRNATarget
JB170471.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:116   CCGGUGUACACCGGACUGUCCGGU   139

1.5 Sequence 8135 from Patent EP2559767 NA coding protein psRNATarget
HI410010.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:116   CCGGUGUACACCGGACUGUCCGGU   139

1.5 Sequence 8135 from Patent EP2074227 NA coding protein psRNATarget
LQ242140.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:116   CCGGUGUACACCGGACUGUCCGGU   139

1.5 Sequence 8135 from Patent EP2985353 NA coding protein psRNATarget
BT068112.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:469   CCGGUGCACACCGGACAGUCCGGU   492

1.0 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT068112.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:599   CCGGUGCACACCGGACAGUCCGGU   622

1.0 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT068112.2
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:723   CCGGUGCACCACCGGACAGUCCGGU   747

3.0 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT065201.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:741   CCGGUGCACACCGGACAGUCCGGU   764

1.0 Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds NA coding protein psRNATarget
BT065201.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||-||=||||||||||||||||
targets:585   UCGG-GUGCACCGGACAGUCCGGU   607

1.0 Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds NA coding protein psRNATarget
NM_001165868.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:621   CCGGUGCACACCGGACAGUCCGGU   644

1.0 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
NM_001165868.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:735   CCGGUGCACACCGGACAGUCCGGU   758

1.0 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
NM_001165868.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:838   CCGGUGCACACCGGACAGUCCGGU   861

1.0 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
BT061141.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:621   CCGGUGCACACCGGACAGUCCGGU   644

1.0 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061141.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:735   CCGGUGCACACCGGACAGUCCGGU   758

1.0 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061141.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:838   CCGGUGCACACCGGACAGUCCGGU   861

1.0 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT036301.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||||||||||||*|||||||
targets:826   CCGGUGUACACCGGACUGUCCGGU   849

1.5 Zea mays full-length cDNA clone ZM_BFb0105P13 mRNA, complete cds NA coding protein psRNATarget
BT036301.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1001   CCGGUGUGCACCGGACUGUCCGGU   1024

2.5 Zea mays full-length cDNA clone ZM_BFb0105P13 mRNA, complete cds NA coding protein psRNATarget
NM_001175687.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:713   CCGGUGCACACCGGACAGUCCGGU   736

1.0 Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA NA coding protein psRNATarget
BT065921.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:713   CCGGUGCACACCGGACAGUCCGGU   736

1.0 Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds NA coding protein psRNATarget
BT061123.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:282   CCGGUGCACACCGGACAGUCCGGU   305

1.0 Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds NA coding protein psRNATarget
BT061123.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||-||=||||||||||||||||
targets:137   UCGG-GUGCACCGGACAGUCCGGU   159

1.0 Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:598   CCGGUGCACACCGGACAGUCCGGU   621

1.0 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:696   CCGGUGCACACCGGACAGUCCGGU   719

1.0 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:799   CCGGUGCACCACCGGACAGUCCGGU   823

3.0 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||-|*=||||||||||||||||
targets:484   UCGG-GCGCACCGGACAGUCCGGU   506

2.0 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
NM_001175949.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:598   CCGGUGCACACCGGACAGUCCGGU   621

1.0 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:696   CCGGUGCACACCGGACAGUCCGGU   719

1.0 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:799   CCGGUGCACCACCGGACAGUCCGGU   823

3.0 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||-|*=||||||||||||||||
targets:484   UCGG-GCGCACCGGACAGUCCGGU   506

2.0 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001165861.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:446   CCGGUGCACACCGGACAGUCCGGU   469

1.0 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
NM_001165861.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:560   CCGGUGCACACCGGACAGUCCGGU   583

1.0 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
NM_001165861.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:662   CCGGUGCACCACCGGACAGUCCGGU   686

3.0 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
BT061124.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:446   CCGGUGCACACCGGACAGUCCGGU   469

1.0 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
BT061124.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:560   CCGGUGCACACCGGACAGUCCGGU   583

1.0 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
BT061124.2
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:662   CCGGUGCACCACCGGACAGUCCGGU   686

3.0 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
EU940831.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:294   ACGGUGCACACCGGACAGUCCGGU   317

1.0 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940831.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:408   CCGGUGCACACCGGACAGUCCGGU   431

1.0 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940831.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *=||||*||-|||||||||||||||
targets:532   CUGGUGCACCACCGGACAGUCCGGU   556

3.0 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940831.1
ncRNA:24   CGCCACAU-GUGGCCUGUCAGGCCA   1
  **||||*|-||||||||||||||||
targets:177   CGGGUGGAGCACCGGACAGUCCGGU   201

3.0 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940845.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:1398   CCGGUGCACACCGGACAGUCCGGU   1421

1.0 Zea mays clone 1163633 mRNA sequence NA coding protein psRNATarget
XM_020546123.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:4493   CCGGUGCACACCGGACAGUCCGGU   4516

1.0 PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA NA coding protein psRNATarget
XM_020546123.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||||||
targets:4608   CCGGUGCACACCGGACAGUCCGGU   4631

1.0 PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA NA coding protein psRNATarget
XM_020546123.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:4710   CCGGUGCACCACCGGACAGUCCGGU   4734

3.0 PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA NA coding protein psRNATarget
HI409279.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:108   CCGGUGUGCACCGGACUGUCCGGU   131

2.5 Sequence 7404 from Patent EP2074227 NA coding protein psRNATarget
JB169740.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:108   CCGGUGUGCACCGGACUGUCCGGU   131

2.5 Sequence 7404 from Patent EP2559767 NA coding protein psRNATarget
LQ241409.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:108   CCGGUGUGCACCGGACUGUCCGGU   131

2.5 Sequence 7404 from Patent EP2985353 NA coding protein psRNATarget
EU964336.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *=|||||=||||||||*|||||||
targets:570   CUGGUGUGCACCGGACUGUCCGGU   593

2.5 Zea mays clone 278065 mRNA sequence NA coding protein psRNATarget
BT061709.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  ||*|-||=||||||||||||||||
targets:822   GCUG-GUGCACCGGACAGUCCGGU   844

1.0 Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds NA coding protein psRNATarget
NM_001174416.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  ||*|-||=||||||||||||||||
targets:822   GCUG-GUGCACCGGACAGUCCGGU   844

1.0 Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA NA coding protein psRNATarget
EU964665.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:892   CCGGUGUGCACCGGACUGUCCGGU   915

2.5 Zea mays clone 280715 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU964665.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1102   CCGGUGUGCACCGGACUGUCCGGU   1125

2.5 Zea mays clone 280715 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT070124.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:872   CCGGUGUGCACCGGACUGUCCGGU   895

2.5 Zea mays full-length cDNA clone ZM_BFc0099M20 mRNA, complete cds NA coding protein psRNATarget
BT070124.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1082   CCGGUGUGCACCGGACUGUCCGGU   1105

2.5 Zea mays full-length cDNA clone ZM_BFc0099M20 mRNA, complete cds NA coding protein psRNATarget
NM_001176974.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:872   CCGGUGUGCACCGGACUGUCCGGU   895

2.5 Zea mays uncharacterized LOC100384437 (LOC100384437), mRNA NA coding protein psRNATarget
NM_001176974.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1082   CCGGUGUGCACCGGACUGUCCGGU   1105

2.5 Zea mays uncharacterized LOC100384437 (LOC100384437), mRNA NA coding protein psRNATarget
BT054327.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1448   CCGGUGUGCACCGGACUGUCCGGU   1471

2.5 Zea mays full-length cDNA clone ZM_BFb0334B17 mRNA, complete cds NA coding protein psRNATarget
NM_001152486.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:1448   CCGGUGUGCACCGGACUGUCCGGU   1471

2.5 Zea mays hypothetical protein (LOC100279484), mRNA NA coding protein psRNATarget
BT019242.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *=||-||=||||||||*|||||||
targets:634   CUGG-GUGCACCGGACUGUCCGGU   656

2.5 Zea mays clone Contig915.F mRNA sequence NA coding protein psRNATarget
EZ079086.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:50   CCGGUGUGCACCGGACUGUCCGGU   73

2.5 TSA: Zea mays contig14725, mRNA sequence NA coding protein psRNATarget
EZ049532.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:49   CCGGUGUGCACCGGACUGUCCGGU   72

2.5 TSA: Zea mays contig50650, mRNA sequence NA coding protein psRNATarget
EU971710.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:218   CCGGUGUGCACCGGACUGUCCGGU   241

2.5 Zea mays clone 369445 mRNA sequence NA coding protein psRNATarget
EU971710.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *||||||=||||||||*|||||||
targets:413   CCGGUGUGCACCGGACUGUCCGGU   436

2.5 Zea mays clone 369445 mRNA sequence NA coding protein psRNATarget
BT086229.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*||||=||||||||||||
targets:532   CCGGUGCACACUGGACAGUCCGGU   555

2.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget
BT086229.2
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:646   CCGGUGAACCACCGGACAGUCCGGU   670

3.0 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget
EU940974.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*||||=||||||||||||
targets:2654   CCGGUGCACACUGGACAGUCCGGU   2677

2.5 Zea mays clone 1225259 mRNA sequence NA coding protein psRNATarget
EU940974.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||||||=|||
targets:2768   CCGGUGCACACCGGACAGUCUGGU   2791

2.5 Zea mays clone 1225259 mRNA sequence NA coding protein psRNATarget
JB169499.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7163 from Patent EP2559767 NA coding protein psRNATarget
HI408938.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7063 from Patent EP2074227 NA coding protein psRNATarget
LQ241168.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7163 from Patent EP2985353 NA coding protein psRNATarget
JB169399.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7063 from Patent EP2559767 NA coding protein psRNATarget
LQ242313.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 8308 from Patent EP2985353 NA coding protein psRNATarget
HI410183.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 8308 from Patent EP2074227 NA coding protein psRNATarget
LQ241068.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7063 from Patent EP2985353 NA coding protein psRNATarget
JB170644.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 8308 from Patent EP2559767 NA coding protein psRNATarget
HI409038.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7163 from Patent EP2074227 NA coding protein psRNATarget
JB169901.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7565 from Patent EP2559767 NA coding protein psRNATarget
HI409440.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7565 from Patent EP2074227 NA coding protein psRNATarget
LQ241570.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:29   CCGGUGCACCACCGGACAGUCCGGU   53

3.0 Sequence 7565 from Patent EP2985353 NA coding protein psRNATarget
EZ106959.1
ncRNA:24   CGCCACA-UGUGGCCUGUCAGGCCA   1
  *|||||*-|||||||||||||||||
targets:93   CCGGUGGCACACCGGACAGUCCGGU   117

3.0 TSA: Zea mays contig42617, mRNA sequence NA coding protein psRNATarget
BT069074.2
ncRNA:24   CGCCAC-AUGUGGCCUGUCAGGCCA   1
  *|||||-|*||||||||||||||||
targets:679   CCGGUGCUUCACCGGACAGUCCGGU   703

3.0 Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds NA coding protein psRNATarget
BT083610.2
ncRNA:24   CGCCACA-UGUGGCCUGUCAGGCCA   1
  *|||||*-|||||||||||||||||
targets:796   CCGGUGGCACACCGGACAGUCCGGU   820

3.0 Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds NA coding protein psRNATarget
BT083610.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  ||*|-|*|||||||||||||||||
targets:696   GCUG-GCACACCGGACAGUCCGGU   718

1.0 Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds NA coding protein psRNATarget
BT066461.2
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *|||||*||-|||||||||||||||
targets:849   CCGGUGCACCACCGGACAGUCCGGU   873

3.0 Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds NA coding protein psRNATarget
BT066461.2
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||*|||||||||
targets:610   CCGGUGCACACCGGUCAGUCCGGU   633

2.5 Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds NA coding protein psRNATarget
JB170297.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||*|||||||
targets:34   CCGGUGCACACCGGACUGUCCGGU   57

2.5 Sequence 7961 from Patent EP2559767 NA coding protein psRNATarget
LQ241966.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||*|||||||
targets:34   CCGGUGCACACCGGACUGUCCGGU   57

2.5 Sequence 7961 from Patent EP2985353 NA coding protein psRNATarget
HI409836.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||*|||||||
targets:34   CCGGUGCACACCGGACUGUCCGGU   57

2.5 Sequence 7961 from Patent EP2074227 NA coding protein psRNATarget
BT016820.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *|||||*|||||||||*|||||||
targets:202   CCGGUGCACACCGGACUGUCCGGU   225

2.5 Zea mays clone Contig653 mRNA sequence NA coding protein psRNATarget
BT016820.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  |*||*|||||||||||*|||||||
targets:5   GAGGGGUACACCGGACUGUCCGGU   28

1.5 Zea mays clone Contig653 mRNA sequence NA coding protein psRNATarget
LQ242039.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *=||||*||-|||||||||||||||
targets:31   CUGGUGCACCACCGGACAGUCCGGU   55

3.0 Sequence 8034 from Patent EP2985353 NA coding protein psRNATarget
HI409909.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *=||||*||-|||||||||||||||
targets:31   CUGGUGCACCACCGGACAGUCCGGU   55

3.0 Sequence 8034 from Patent EP2074227 NA coding protein psRNATarget
JB170370.1
ncRNA:24   CGCCACAUG-UGGCCUGUCAGGCCA   1
  *=||||*||-|||||||||||||||
targets:31   CUGGUGCACCACCGGACAGUCCGGU   55

3.0 Sequence 8034 from Patent EP2559767 NA coding protein psRNATarget
HI409410.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *****|*|||||||||||||||||
targets:10   CACUGGCACACCGGACAGUCCGGU   33

1.0 Sequence 7535 from Patent EP2074227 NA coding protein psRNATarget
JB169871.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *****|*|||||||||||||||||
targets:10   CACUGGCACACCGGACAGUCCGGU   33

1.0 Sequence 7535 from Patent EP2559767 NA coding protein psRNATarget
LQ241540.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  *****|*|||||||||||||||||
targets:10   CACUGGCACACCGGACAGUCCGGU   33

1.0 Sequence 7535 from Patent EP2985353 NA coding protein psRNATarget
JB170118.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  **|**|*||||||||||*||||||
targets:34   CGGUGGCACACCGGACAAUCCGGU   57

2.5 Sequence 7782 from Patent EP2559767 NA coding protein psRNATarget
LQ241787.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  **|**|*||||||||||*||||||
targets:34   CGGUGGCACACCGGACAAUCCGGU   57

2.5 Sequence 7782 from Patent EP2985353 NA coding protein psRNATarget
HI409657.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  **|**|*||||||||||*||||||
targets:34   CGGUGGCACACCGGACAAUCCGGU   57

2.5 Sequence 7782 from Patent EP2074227 NA coding protein psRNATarget
LQ242062.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  **|**|**||||||||||||||||
targets:29   UGGUGGCCCACCGGACAGUCCGGU   52

3.0 Sequence 8057 from Patent EP2985353 NA coding protein psRNATarget
JB170393.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  **|**|**||||||||||||||||
targets:29   UGGUGGCCCACCGGACAGUCCGGU   52

3.0 Sequence 8057 from Patent EP2559767 NA coding protein psRNATarget
HI409932.1
ncRNA:24   CGCCACAUGUGGCCUGUCAGGCCA   1
  **|**|**||||||||||||||||
targets:29   UGGUGGCCCACCGGACAGUCCGGU   52

3.0 Sequence 8057 from Patent EP2074227 NA coding protein psRNATarget
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