Search result

BaseInfo

ncRNA ID osa-miR2869
Species Oryza sativa
Class miRNA
Genome position Chr5:26915329-26915489 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UCCCGACAUUAAAUUCUGGGC - 31
Stem-loop(if miRNA) GGGAGGAGGAG   -             U                        GAA   U  G   UU    U   AG AG  G
           CUU CCCAGGAUUUAAU UUGGGAGGUGGUGAGUACUAAGGA   CAG AU UUG  CAGC GGC  G  CU C
           ||| ||||||||||||| ||||||||||||||||||||||||   ||| || |||  |||| |||  |  ||
           GGA GGGUCUUAAAUUA AGCCCUCCAUUACUCAUGGUUCCU   GUU UG GAC  GUCG CCG  C  GG A
----UGAAUUA   C             C                        --A   -  G   CG    -   AA GA  A
Stem-loop sequence GGGAGGAGGAGCUUCCCAGGAUUUAAUUUUGGGAGGUGGUGAGUACUAAGGAGAACAGUAUGUUGUUCAGCUGGCAGGAGCUGCAAGGAGCAAGCCGCUGGCCAGGGUUUGAUCCUUGGUACUCAUUACCUCCCGACAUUAAAUUCUGGGCAGGAUUAAGU

Reference

1 PMID:19903869
"Rice MicroRNA effector complexes and targets";
Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y;
Plant Cell. 21:3421-3435(2009).