ncRNA ID | novel_zma_miR1791 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:118730340-118730566 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCUCUUGGACACUAGAAAUGGUA - 24 |
Stem-loop(if miRNA) |
--              A              U     U  C  A        A    G        AACA C      C   A  A              AGAAAAAAAA  UUGCAGA   AGCUCUUGGACACU GAAAUGGUACUAUU AUUAG AA AU CUGAGAAA GUUG UUAUUAUC    G ACACCG AGC AU GAAAUUUCCAUUUU          UC       C   |||||||||||||| |||||||||||||| ||||| || || |||||||| |||| ||||||||    | |||||| ||| || ||||||||||||||          ||       A   UCGAGAACCUGUGA CUUUACCAUGAUAA UAGUC UU UA GAUUCUUU UAAC AGUAAUAG    C UGUGGC UCG UA UUUUAAAGGUAAAA          CC       A AA              C              C     C  A  C        G    A        ---A A      U   C  A              ---------A  GUUCGGA |
Stem-loop sequence | AGCUCUUGGACACUAGAAAUGGUACUAUUUAUUAGUAACAUACUGAGAAAAGUUGGUUAUUAUCAACAGCACACCGCAGCAAUAGAAAUUUCCAUUUUAGAAAAAAAAUCUUGCAGACAAAGGCUUGCCAAAAAUGGAAAUUUUAAUCGCUUCGGUGUACAGAUAAUGAACAAUGUUUCUUAGCAUAUUCCUGAUCAAUAGUACCAUUUCCAGUGUCCAAGAGCUAA |