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BaseInfo

ncRNA ID novel_zma_miR1791
Species Zea mays
Class miRNA
Genome position Chr6:118730340-118730566 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089715
Length 24
Mature sequence(if miRNA) 1 - AGCUCUUGGACACUAGAAAUGGUA - 24
Stem-loop(if miRNA) --              A              U     U  C  A        A    G        AACA C      C   A  A              AGAAAAAAAA  UUGCAGA
  AGCUCUUGGACACU GAAAUGGUACUAUU AUUAG AA AU CUGAGAAA GUUG UUAUUAUC    G ACACCG AGC AU GAAAUUUCCAUUUU          UC       C
  |||||||||||||| |||||||||||||| ||||| || || |||||||| |||| ||||||||    | |||||| ||| || ||||||||||||||          ||       A
  UCGAGAACCUGUGA CUUUACCAUGAUAA UAGUC UU UA GAUUCUUU UAAC AGUAAUAG    C UGUGGC UCG UA UUUUAAAGGUAAAA          CC       A
AA              C              C     C  A  C        G    A        ---A A      U   C  A              ---------A  GUUCGGA
Stem-loop sequence AGCUCUUGGACACUAGAAAUGGUACUAUUUAUUAGUAACAUACUGAGAAAAGUUGGUUAUUAUCAACAGCACACCGCAGCAAUAGAAAUUUCCAUUUUAGAAAAAAAAUCUUGCAGACAAAGGCUUGCCAAAAAUGGAAAUUUUAAUCGCUUCGGUGUACAGAUAAUGAACAAUGUUUCUUAGCAUAUUCCUGAUCAAUAGUACCAUUUCCAGUGUCCAAGAGCUAA