Search result

BaseInfo

ncRNA ID	novel_zma_miR1783
Species	Zea mays
Class	miRNA
Genome position	Chr5:73045355-73045406 [+]
Reference genome	RefGen_v4
Source	SRR2089711
Length	23
Mature sequence(if miRNA)	1 - UUCUUUCGGGCACUCGGCAAAGA - 23
Stem-loop(if miRNA)	-UUC   -  -              A     UUU CG GGCACUCGGCAAAG A     ||| || |||||||||||||| G     AAA GC CCGUGAGCCGUUUC C CAAA   C  A              U
Stem-loop sequence	UUCUUUCGGGCACUCGGCAAAGAAGCUCUUUGCCGAGUGCCACGCAAAAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001165647.1	ncRNA:23   AGAAACGGCUCACGGGCUUUCUU   1   ||||||||||||||||||||*|| targets:146   UCUUUGCCGAGUGCCCGAAAAAA   168 Target Full Sequence	1.5	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:23   AGAAACGGCUCACGGGCUUUCUU   1   ||||||||||||||||||||*|| targets:146   UCUUUGCCGAGUGCCCGAAAAAA   168 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020543430.1	ncRNA:23   AGAAACGGCUCACGGGCUUUCUU   1   ||||||||||||||||||||*|| targets:1178   UCUUUGCCGAGUGCCCGAAAUAA   1200 Target Full Sequence	1.5	PREDICTED: Zea mays protein enabled homolog (LOC103636633), mRNA	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:23   AGAAACGGCUCACGGGCUUUCUU   1   ||||||||||||||||||||*|| targets:2165   UCUUUGCCGAGUGCCCGAAAAAA   2187 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:23   AGAAACGGCUCACGGGCUUUCUU   1   ||||||||||||||||||||*|| targets:2165   UCUUUGCCGAGUGCCCGAAAAAA   2187 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget