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BaseInfo

ncRNA ID novel_zma_miR1780
Species Zea mays
Class miRNA
Genome position Chr5:62071987-62072067 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2287162
Length 24
Mature sequence(if miRNA) 58 - ACCUAGAACACUCGGCAAAGACGC - 81
Stem-loop(if miRNA) --U              A     A               U
   UCUUUGCCGAGUGU UUAGG GACACUCGGCAAAGG A
   |||||||||||||| ||||| ||||||||||||||| A
   AGAAACGGCUCACA GAUCC CUGUGAGCCGUUUCU C
CGC              A     A               U
Stem-loop sequence UUCUUUGCCGAGUGUAUUAGGAGACACUCGGCAAAGGUAACUUCUUUGCCGAGUGUCACCUAGAACACUCGGCAAAGACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   CGCAGAAA-CGGCUCACAAGAUCCA   1
  |=|*||||-||||||||||||||||
targets:527   GUGACUUUUGCCGAGUGUUCUAGGU   551

2.0 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget