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BaseInfo

ncRNA ID novel_zma_miR1765
Species Zea mays
Class miRNA
Genome position Chr5:38492697-38492765 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 24
Mature sequence(if miRNA) 1 - GGACUGCUCGGCGGCGGGGACUGC - 24
Stem-loop(if miRNA) --    G    -    U     GG     A G AGA
  AGUU CUGC GUCG GGCGG  UUUGC G G   G
  |||| |||| |||| |||||  ||||| | |
  UCAG GGCG CGGC UCGUC  GGGCG C C   G
CG    G    G    -     -A     G G GGG
Stem-loop sequence AGUUGCUGCGUCGUGGCGGGGUUUGCAGGGAGAGGGGGCGCGGCGGGACUGCUCGGCGGCGGGGACUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008645153.2
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:81   GCAGUCCCCGCCGCCGAGCAGUCC   104

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020553240.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:69   GCAGUCCCCGCCGCCGAGCAGUCC   92

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020553231.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:71   GCAGUCCCCGCCGCCGAGCAGUCC   94

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020553241.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:71   GCAGUCCCCGCCGCCGAGCAGUCC   94

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X15, mRNA NA coding protein psRNATarget
XM_020553239.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:71   GCAGUCCCCGCCGCCGAGCAGUCC   94

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X13, mRNA NA coding protein psRNATarget
XM_020553236.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:63   GCAGUCCCCGCCGCCGAGCAGUCC   86

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008645148.2
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:71   GCAGUCCCCGCCGCCGAGCAGUCC   94

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020553242.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:89   GCAGUCCCCGCCGCCGAGCAGUCC   112

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X16, mRNA NA coding protein psRNATarget
XM_020553238.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:40   GCAGUCCCCGCCGCCGAGCAGUCC   63

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X11, mRNA NA coding protein psRNATarget
XM_008645147.2
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  ||||||||||||||||||||||||
targets:71   GCAGUCCCCGCCGCCGAGCAGUCC   94

0.0 PREDICTED: Zea mays uncharacterized LOC100277026 (LOC100277026), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008654980.2
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  |||||||||||=||||||||||||
targets:388   GCAGUCCCCGCUGCCGAGCAGUCC   411

1.5 PREDICTED: Zea mays uncharacterized LOC103633278 (LOC103633278), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020540771.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  |||||||||||=||||||||||||
targets:388   GCAGUCCCCGCUGCCGAGCAGUCC   411

1.5 PREDICTED: Zea mays uncharacterized LOC103633278 (LOC103633278), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020541727.1
ncRNA:24   CGUCAGGGGCGGCGGCUCGUCAGG   1
  |||||||||||=||||||||||||
targets:165   GCAGUCCCCGCUGCCGAGCAGUCC   188

1.5 PREDICTED: Zea mays predicted GPI-anchored protein 58 (LOC103634317), mRNA NA coding protein psRNATarget
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