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BaseInfo

ncRNA ID	novel_zma_miR1764
Species	Zea mays
Class	miRNA
Genome position	Chr3:157480425-157480622 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - GAUCGUCCGGCCCUAGGGCGCGGA - 24
Stem-loop(if miRNA)	--  -      UA   -A           ---     U   ------        GUCC      ---   -  GCU  -UUGCU  C     U           G  U   CG GCCUUA  GGC  GACGAUCCGCC   CGUGU AAC      AAUUCUUG    GAAGUC   CAG GU   UC      GU AGGUC CGGACGGUCCG CC U   || ||||||  |||  |||||||||||   ||||| |||      ||||||||    ||||||   ||| ||   ||      || ||||| ||||||||||| || G   GC CGGGAU  CCG  CUGCUAGGCGG   GUAUA UUG      UUAAGGAC    CUUUAG   GUC CA   AG      CA UCCAG GCCUGUCAGGU GG A AG  G      -C   GC           CAU     -   CCGAUA        -AAA      ACA   U  -AC  UCUUUU  A     -           G  U
Stem-loop sequence	CGGCCUUAUAGGCAGACGAUCCGCCCGUGUUAACAAUUCUUGGUCCGAAGUCCAGGUGCUUCUUGCUGUCAGGUCUCGGACGGUCCGGCCUUGAUGGGUGGACUGUCCGGACCUAACUUUUCUGACAACUCUGACAGAUUUCAAACAGGAAUUAUAGCCGUUAUAUGUACGGCGGAUCGUCCGGCCCUAGGGCGCGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ049111.1	ncRNA:24   AGGCGCGGGAUCCCGGCCUGCUAG   1   ||||||||||=||||||||||=|| targets:83   UCCGCGCCCUGGGGCCGGACGGUC   106 Target Full Sequence	2.5	TSA: Zea mays contig50229, mRNA sequence	NA	coding protein	psRNATarget
BT061906.1	ncRNA:24   AGGCGCGGGAUCCCGGCCUGCUAG   1   ||||||||||=||||||||||=|| targets:272   UCCGCGCCCUGGGGCCGGACGGUC   295 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0196M13 mRNA, complete cds	NA	coding protein	psRNATarget
EU968855.1	ncRNA:24   AGGCGCGGGAUCCCGGCCUGCUAG   1   |||||||=|||||||||||||=|| targets:780   UCCGCGCUCUAGGGCCGGACGGUC   803 Target Full Sequence	2.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
EU970066.1	ncRNA:24   AGGCGCGGGAUCCCGGCCUGCUAG   1   ||=|||*||||||||||||||=|| targets:916   UCUGCGGCCUAGGGCCGGACGGUC   939 Target Full Sequence	2.5	Zea mays clone 339328 mRNA sequence	NA	coding protein	psRNATarget
EZ104830.1	ncRNA:24   AGGCGCGGGAUCCCGGCCUGCUAG   1   *|||=|*||||||||||||||=|| targets:31   CCCGUGGCCUAGGGCCGGACGGUC   54 Target Full Sequence	2.5	TSA: Zea mays contig40487, mRNA sequence	NA	coding protein	psRNATarget