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BaseInfo

ncRNA ID	novel_zma_miR1758
Species	Zea mays
Class	miRNA
Genome position	Chr5:60562750-60562865 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089713;SRR2089714;SRR2089700
Length	21
Mature sequence(if miRNA)	96 - UUUGGGAGGAAGAGUAAUGGA - 116
Stem-loop(if miRNA)	--        G   A U       A       A CG    G   A  C       CAA   UUUGGGAG AAG G AAUGGAG GGAUUGA G  GCUA AAU CC CACUAUU   U   |||||||| ||| | ||||||| ||||||| |  |||| ||| || |||||||   AAACCCUC UUC C UUACUUC CCUAACU C  CGAU UUA GG GUGAUAA   U AC        G   A U       C       C CA    A   A  A       AUU
Stem-loop sequence	UUUGGGAGGAAGAGUAAUGGAGAGGAUUGAAGCGGCUAGAAUACCCCACUAUUCAAUUUUAAAUAGUGAGGAAUUAUAGCACCCUCAAUCCCCUUCAUUUCACUUGCUCCCAAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238199.1	ncRNA:21   AGGUAAUGAGAAGGAGGGUUU   1   ||||||||||||||||||||| targets:103   UCCAUUACUCUUCCUCCCAAA   123 Target Full Sequence	0.0	Sequence 4194 from Patent EP2985353	NA	coding protein	psRNATarget
HI406069.1	ncRNA:21   AGGUAAUGAGAAGGAGGGUUU   1   ||||||||||||||||||||| targets:103   UCCAUUACUCUUCCUCCCAAA   123 Target Full Sequence	0.0	Sequence 4194 from Patent EP2074227	NA	coding protein	psRNATarget
JB166530.1	ncRNA:21   AGGUAAUGAGAAGGAGGGUUU   1   ||||||||||||||||||||| targets:103   UCCAUUACUCUUCCUCCCAAA   123 Target Full Sequence	0.0	Sequence 4194 from Patent EP2559767	NA	coding protein	psRNATarget
BT036654.1	ncRNA:21   AGGUAAUGAGAAGGAGGGUUU   1   ||||||||||||||||||||| targets:1056   UCCAUUACUCUUCCUCCCAAA   1076 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0128D05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001349849.1	ncRNA:21   AGGUAAUGAGAAGGAGGGUUU   1   ||||||||||||||||||||| targets:889   UCCAUUACUCUUCCUCCCAAA   909 Target Full Sequence	0.0	Zea mays uncharacterized LOC100194187 (LOC100194187), mRNA	NA	coding protein	psRNATarget
EU952717.1	ncRNA:21   AGGUAAUGAGAAGGAGGGUUU   1   ||||||||||||||||||||| targets:889   UCCAUUACUCUUCCUCCCAAA   909 Target Full Sequence	0.0	Zea mays clone 1287070 zinc finger protein mRNA, complete cds	NA	coding protein	psRNATarget