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BaseInfo

ncRNA ID novel_zma_miR1754
Species Zea mays
Class miRNA
Genome position Chr5:100753435-100753483 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089712;SRR2089714;SRR2089704;SRR2089705;SRR2089708
Length 22
Mature sequence(if miRNA) 28 - UCUACGUCGGAGGCGUCCCCAA - 49
Stem-loop(if miRNA) --    -    G     G   -C  A
  UCUA CGUC GAGGC UCC  CA A
  |||| |||| ||||| |||  ||
  AGAU GCAG CUCCG AGG  GU C
UG    C    G     -   CA  U
Stem-loop sequence UCUACGUCGGAGGCGUCCCCAAACUUGACGGAGCCUCGGACGCUAGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538918.1
ncRNA:22   AACCCCUGCGGAGGCUGCAUCU   1
  ||||||||*||||||=||||||
targets:715   UUGGGGACUCCUCCGGCGUAGA   736

2.5 PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA NA coding protein psRNATarget