Search result

BaseInfo

ncRNA ID novel_zma_miR1750
Species Zea mays
Class miRNA
Genome position Chr5:29802050-29802150 [+]
Reference genome RefGen_v4
Source SRR2089711
Length 24
Mature sequence(if miRNA) 78 - CGGGUAGAAUUUUUUUGAUGGGUA - 101
Stem-loop(if miRNA) --    A    U     --       G     ACGAGUAU   UAAGAUUUUAUA
  CCCA CAAG AAAAU  UACCCGU CGGGU        GGG            C
  |||| |||| |||||  ||||||| |||||        |||
  GGGU GUUU UUUUA  AUGGGCA GCCCA        GGU            C
AU    A    -     AG       -     -----AUG   AUAUACCAGCGC
Stem-loop sequence CCCAACAAGUAAAAUUACCCGUGCGGGUACGAGUAUGGGUAAGAUUUUAUACCCGCGACCAUAUAUGGGUAACCCGACGGGUAGAAUUUUUUUGAUGGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943209.1
ncRNA:24   AUGGGUAGUUUUUUUAAGAUGGGC   1
  ||*=|||||*|||||||||||=||
targets:1357   UAAUCAUCAUAAAAAUUCUACUCG   1380

2.5 Zea mays clone 1587365 mRNA sequence NA coding protein psRNATarget