ncRNA ID | novel_zma_miR1750 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:29802050-29802150 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711 |
Length | 24 |
Mature sequence(if miRNA) | 78 - CGGGUAGAAUUUUUUUGAUGGGUA - 101 |
Stem-loop(if miRNA) |
--    A    U     --       G     ACGAGUAU   UAAGAUUUUAUA   CCCA CAAG AAAAU  UACCCGU CGGGU        GGG            C   |||| |||| |||||  ||||||| |||||        |||   GGGU GUUU UUUUA  AUGGGCA GCCCA        GGU            C AU    A    -     AG       -     -----AUG   AUAUACCAGCGC |
Stem-loop sequence | CCCAACAAGUAAAAUUACCCGUGCGGGUACGAGUAUGGGUAAGAUUUUAUACCCGCGACCAUAUAUGGGUAACCCGACGGGUAGAAUUUUUUUGAUGGGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU943209.1 |
|
2.5 | Zea mays clone 1587365 mRNA sequence | NA | coding protein | psRNATarget |