ncRNA ID | novel_zma_miR1745 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:68345232-68345373 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089712;SRR2089701;SRR2089704 |
Length | 24 |
Mature sequence(if miRNA) | 119 - AACUUUCUAGAGGUGGCCGUAGGA - 142 |
Stem-loop(if miRNA) |
--   GA    G  G           A    C   --    UG     -   C  AAAC           GA     CUA  GCUG CU UAGGAAGUUAG UUUU GCU  UGAC  GUCAA CGA UG    CUAACUUCCUA  GGA   |||  |||| || ||||||||||| |||| |||  ||||  ||||| ||| ||    |||||||||||  ||G   GAU  CGGU GA AUCUUUCAAUC AAAG CGA  ACUG  CGGUU GCU AU    GAUUGAAGGAU  CCG AG   GC    G  G           C    U   CA    GU     U   U  ---C           -G   |
Stem-loop sequence | CUAGAGCUGGCUGUAGGAAGUUAGAUUUUCGCUUGACUGGUCAACGACUGAAACCUAACUUCCUAGAGGAGGCCGUAGGAAGUUAGCUAUUCGUUUGGCUGGUCAACAGCUGAAACCUAACUUUCUAGAGGUGGCCGUAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT086229.2 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget |