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BaseInfo

ncRNA ID novel_zma_miR1745
Species Zea mays
Class miRNA
Genome position Chr10:68345232-68345373 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089712;SRR2089701;SRR2089704
Length 24
Mature sequence(if miRNA) 119 - AACUUUCUAGAGGUGGCCGUAGGA - 142
Stem-loop(if miRNA) --   GA    G  G           A    C   --    UG     -   C  AAAC           GA  
  CUA  GCUG CU UAGGAAGUUAG UUUU GCU  UGAC  GUCAA CGA UG    CUAACUUCCUA  GGA
  |||  |||| || ||||||||||| |||| |||  ||||  ||||| ||| ||    |||||||||||  ||G
  GAU  CGGU GA AUCUUUCAAUC AAAG CGA  ACUG  CGGUU GCU AU    GAUUGAAGGAU  CCG
AG   GC    G  G           C    U   CA    GU     U   U  ---C           -G  
Stem-loop sequence CUAGAGCUGGCUGUAGGAAGUUAGAUUUUCGCUUGACUGGUCAACGACUGAAACCUAACUUCCUAGAGGAGGCCGUAGGAAGUUAGCUAUUCGUUUGGCUGGUCAACAGCUGAAACCUAACUUUCUAGAGGUGGCCGUAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086229.2
ncRNA:24   AGGAUGCCGGUGGAGAUCUUUCAA   1
  |=||||||||*|||||||||||||
targets:1137   UUCUACGGCCUCCUCUAGAAAGUU   1160

1.0 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget