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BaseInfo

ncRNA ID	novel_zma_miR1741
Species	Zea mays
Class	miRNA
Genome position	Chr5:207847485-207847554 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089714;SRR2287161;SRR2287164;SRR5451003;SRR5451005;SRR5451006;SRR1997866;SRR2089699;SRR2089700;SRR2089701;SRR2089703
Length	24
Mature sequence(if miRNA)	1 - AGCGACUAAUAAAAAGAAACGGAA - 24
Stem-loop(if miRNA)	--                                A   CCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCA U   ||||||||||||||||||||||||||||||||   GGCAAAGAAAAAUAAUCAGCGACCUAUCACGU U AA                                U
Stem-loop sequence	CCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAUUUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020544902.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:3156   AUCCGUUUCUUUUUAUUAGUCGCU   3179 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544903.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:3147   AUCCGUUUCUUUUUAUUAGUCGCU   3170 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:2050   CUCCGUUUCUUUUUAUUAGUCGCU   2073 Target Full Sequence	0.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1983   CUCCGUUUCUUUUUAUUAGUCGCU   2006 Target Full Sequence	0.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1814   CUCCGUUUCUUUUUAUUAGUCGCU   1837 Target Full Sequence	0.0	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
XM_008656936.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:170   CUCCGUUUCUUUUUAUUAGUCGCU   193 Target Full Sequence	0.0	PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1606   CUCCGUUUCUUUUUAUUAGUCGCU   1629 Target Full Sequence	0.0	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT024153.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:196   CUCCGUUUCUUUUUAUUAGUCGCU   219 Target Full Sequence	0.0	Zea mays clone EL01N0438E01 mRNA sequence	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1090   AUCCGUUUCUUUUUAUUAGUCGCU   1113 Target Full Sequence	0.0	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget
BT037092.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1090   AUCCGUUUCUUUUUAUUAGUCGCU   1113 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
EZ061772.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:190   CUCCGUUUCUUUUUAUUAGUCGCU   213 Target Full Sequence	0.0	TSA: Zea mays contig62894, mRNA sequence	NA	coding protein	psRNATarget
EU973473.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:655   CUCCGUUUCUUUUUAUUAGUCGCU   678 Target Full Sequence	0.0	Zea mays clone 399411 mRNA sequence	NA	coding protein	psRNATarget
JB166321.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:11   CUCCGUUUCUUUUUAUUAGUCGCU   34 Target Full Sequence	0.0	Sequence 3985 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237990.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:11   CUCCGUUUCUUUUUAUUAGUCGCU   34 Target Full Sequence	0.0	Sequence 3985 from Patent EP2985353	NA	coding protein	psRNATarget
HI405860.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:11   CUCCGUUUCUUUUUAUUAGUCGCU   34 Target Full Sequence	0.0	Sequence 3985 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235495.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1490 from Patent EP2985353	NA	coding protein	psRNATarget
HI403365.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1490 from Patent EP2074227	NA	coding protein	psRNATarget
JB163826.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1490 from Patent EP2559767	NA	coding protein	psRNATarget
HI405828.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:6   CUCCGUUUCUUUUUAUUAGUCGCU   29 Target Full Sequence	0.0	Sequence 3953 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237960.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:6   CUCCGUUUCUUUUUAUUAGUCGCU   29 Target Full Sequence	0.0	Sequence 3955 from Patent EP2985353	NA	coding protein	psRNATarget
JB166289.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:6   CUCCGUUUCUUUUUAUUAGUCGCU   29 Target Full Sequence	0.0	Sequence 3953 from Patent EP2559767	NA	coding protein	psRNATarget
JB166291.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:6   CUCCGUUUCUUUUUAUUAGUCGCU   29 Target Full Sequence	0.0	Sequence 3955 from Patent EP2559767	NA	coding protein	psRNATarget
HI405830.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:6   CUCCGUUUCUUUUUAUUAGUCGCU   29 Target Full Sequence	0.0	Sequence 3955 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237958.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:6   CUCCGUUUCUUUUUAUUAGUCGCU   29 Target Full Sequence	0.0	Sequence 3953 from Patent EP2985353	NA	coding protein	psRNATarget
HI403385.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1510 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235503.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1498 from Patent EP2985353	NA	coding protein	psRNATarget
JB163846.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1510 from Patent EP2559767	NA	coding protein	psRNATarget
HI403373.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1498 from Patent EP2074227	NA	coding protein	psRNATarget
JB163834.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1498 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235515.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1510 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||||||||| targets:119   CUCUGUUUCUUUUUAUUAGUCGCU   142 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|=||||||||||||||||||||| targets:1337   CUUCGUUUCUUUUUAUUAGUCGCU   1360 Target Full Sequence	0.0	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001328133.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||=||||||||||||||| targets:770   CUCCGUUUUUUUUUAUUAGUCGCU   793 Target Full Sequence	1.0	Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA	NA	coding protein	psRNATarget
BT070166.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||=||||||||||||||| targets:770   CUCCGUUUUUUUUUAUUAGUCGCU   793 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||||||||| targets:99   CUCUGUUUCUUUUUAUUAGUCGCU   122 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
JB166285.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||||||||||||||||=| targets:6   CUCCGUUUCUUUUUAUUAGUCGUU   29 Target Full Sequence	1.5	Sequence 3949 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237954.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||||||||||||||||=| targets:6   CUCCGUUUCUUUUUAUUAGUCGUU   29 Target Full Sequence	1.5	Sequence 3949 from Patent EP2985353	NA	coding protein	psRNATarget
HI405824.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||||||||||||||||=| targets:6   CUCCGUUUCUUUUUAUUAGUCGUU   29 Target Full Sequence	1.5	Sequence 3949 from Patent EP2074227	NA	coding protein	psRNATarget
JB163728.1	ncRNA:24   AAGGCAAAGAAAAA-UAAUCAGCGA   1   *|||||||||||||-|||||||||| targets:106   CUCCGUUUCUUUUUUAUUAGUCGCU   130 Target Full Sequence	3.0	Sequence 1392 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235397.1	ncRNA:24   AAGGCAAAGAAAAA-UAAUCAGCGA   1   *|||||||||||||-|||||||||| targets:106   CUCCGUUUCUUUUUUAUUAGUCGCU   130 Target Full Sequence	3.0	Sequence 1392 from Patent EP2985353	NA	coding protein	psRNATarget
HI403267.1	ncRNA:24   AAGGCAAAGAAAAA-UAAUCAGCGA   1   *|||||||||||||-|||||||||| targets:106   CUCCGUUUCUUUUUUAUUAGUCGCU   130 Target Full Sequence	3.0	Sequence 1392 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:3704   CUCCGUUUCUUUUUAUUUGUCGCU   3727 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:2925   CUCCGUUUCUUUUUAUUUGUCGCU   2948 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:2819   CUCCGUUUCUUUUUAUUUGUCGCU   2842 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:2802   CUCCGUUUCUUUUUAUUUGUCGCU   2825 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1469   CUCCGUUUCUUUUUAUUUGUCGCU   1492 Target Full Sequence	1.5	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:2441   CUCCGUUUCUUUUUAUUUGUCGCU   2464 Target Full Sequence	1.5	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:2502   CUCCGUUUCUUUUUAUUUGUCGCU   2525 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001196908.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:778   CUCCGUUUCUUUUUAUUUGUCGCU   801 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA	NA	coding protein	psRNATarget
BT088136.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:778   CUCCGUUUCUUUUUAUUUGUCGCU   801 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1549   CUCCGUUUCUUUUUAUUUGUCGCU   1572 Target Full Sequence	1.5	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1533   CUCCGUUUCUUUUUAUUUGUCGCU   1556 Target Full Sequence	1.5	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1278   CUCCGUUUCUUUUUAUUUGUCGCU   1301 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1361   CUCCGUUUCUUUUUAUUUGUCGCU   1384 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:147   CUCCGUUUCUUUUUAUUUGUCGCU   170 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1294   CUCCGUUUCUUUUUAUUUGUCGCU   1317 Target Full Sequence	1.5	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1294   CUCCGUUUCUUUUUAUUUGUCGCU   1317 Target Full Sequence	1.5	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:1172   CUCCGUUUCUUUUUAUUUGUCGCU   1195 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:236   CUCCGUUUCUUUUUAUUUGUCGCU   259 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:575   CUCCGUUUCUUUUUAUUUGUCGCU   598 Target Full Sequence	1.5	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:575   CUCCGUUUCUUUUUAUUUGUCGCU   598 Target Full Sequence	1.5	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:503   CUCCGUUUCUUUUUAUUUGUCGCU   526 Target Full Sequence	1.5	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40 Target Full Sequence	1.5	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
HI403369.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40 Target Full Sequence	1.5	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
JB163830.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40 Target Full Sequence	1.5	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget
JB163755.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40 Target Full Sequence	1.5	Sequence 1419 from Patent EP2559767	NA	coding protein	psRNATarget
HI403294.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40 Target Full Sequence	1.5	Sequence 1419 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235424.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40 Target Full Sequence	1.5	Sequence 1419 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241729.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7724 from Patent EP2985353	NA	coding protein	psRNATarget
HI409599.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7724 from Patent EP2074227	NA	coding protein	psRNATarget
JB170060.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7724 from Patent EP2559767	NA	coding protein	psRNATarget
HI409328.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7453 from Patent EP2074227	NA	coding protein	psRNATarget
JB169789.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7453 from Patent EP2559767	NA	coding protein	psRNATarget
HI408710.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
HI410196.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
JB169171.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241458.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7453 from Patent EP2985353	NA	coding protein	psRNATarget
JB170657.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
HI408570.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6695 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240700.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6695 from Patent EP2985353	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241746.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7741 from Patent EP2985353	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
JB169031.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6695 from Patent EP2559767	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
JB170077.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7741 from Patent EP2559767	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
HI409616.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7741 from Patent EP2074227	NA	coding protein	psRNATarget
JB170076.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7740 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241745.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7740 from Patent EP2985353	NA	coding protein	psRNATarget
HI409615.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33 Target Full Sequence	1.5	Sequence 7740 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240984.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30 Target Full Sequence	1.5	Sequence 6979 from Patent EP2985353	NA	coding protein	psRNATarget
JB169315.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30 Target Full Sequence	1.5	Sequence 6979 from Patent EP2559767	NA	coding protein	psRNATarget
HI408854.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||| targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30 Target Full Sequence	1.5	Sequence 6979 from Patent EP2074227	NA	coding protein	psRNATarget
JB163835.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||||||||||||||*||| targets:1   CUCCGUUUCUUUUUAUUAGUAGCU   24 Target Full Sequence	1.5	Sequence 1499 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235504.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||||||||||||||*||| targets:1   CUCCGUUUCUUUUUAUUAGUAGCU   24 Target Full Sequence	1.5	Sequence 1499 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235497.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||*|| targets:1   CUCCGUUUCUUUUUAUUAGUCACU   24 Target Full Sequence	1.5	Sequence 1492 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235443.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||||||||| targets:1   CUCCAUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1438 from Patent EP2985353	NA	coding protein	psRNATarget
HI403313.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||||||||| targets:1   CUCCAUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1438 from Patent EP2074227	NA	coding protein	psRNATarget
HI403367.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||*|| targets:1   CUCCGUUUCUUUUUAUUAGUCACU   24 Target Full Sequence	1.5	Sequence 1492 from Patent EP2074227	NA	coding protein	psRNATarget
HI403374.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||||||||||||||||||*||| targets:1   CUCCGUUUCUUUUUAUUAGUAGCU   24 Target Full Sequence	1.5	Sequence 1499 from Patent EP2074227	NA	coding protein	psRNATarget
JB163774.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||||||||| targets:1   CUCCAUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1438 from Patent EP2559767	NA	coding protein	psRNATarget
JB163828.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||||||*|| targets:1   CUCCGUUUCUUUUUAUUAGUCACU   24 Target Full Sequence	1.5	Sequence 1492 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235469.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||||||||| targets:1   CUCCAUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1464 from Patent EP2985353	NA	coding protein	psRNATarget
JB163800.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||||||||| targets:1   CUCCAUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1464 from Patent EP2559767	NA	coding protein	psRNATarget
HI403339.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||||||||| targets:1   CUCCAUUUCUUUUUAUUAGUCGCU   24 Target Full Sequence	0.0	Sequence 1464 from Patent EP2074227	NA	coding protein	psRNATarget
EU957018.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:2006   CUCUGUUUCUUUUUAUUUGUCGCU   2029 Target Full Sequence	1.5	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656166.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1272   CUCUGUUUCUUUUUAUUUGUCGCU   1295 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT035950.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1408   CUCUGUUUCUUUUUAUUUGUCGCU   1431 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138729.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1408   CUCUGUUUCUUUUUAUUUGUCGCU   1431 Target Full Sequence	1.5	Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA	NA	coding protein	psRNATarget
XM_008656167.2	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1227   CUCUGUUUCUUUUUAUUUGUCGCU   1250 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT088158.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1208   CUCUGUUUCUUUUUAUUUGUCGCU   1231 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds	NA	coding protein	psRNATarget
EU973028.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1174   CUCUGUUUCUUUUUAUUUGUCGCU   1197 Target Full Sequence	1.5	Zea mays clone 391970 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU956063.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1068   CUCUGUUUCUUUUUAUUUGUCGCU   1091 Target Full Sequence	1.5	Zea mays clone 1556707 mRNA sequence	NA	coding protein	psRNATarget
BT068381.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:1115   CUCUGUUUCUUUUUAUUUGUCGCU   1138 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds	NA	coding protein	psRNATarget
HI409094.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30 Target Full Sequence	1.5	Sequence 7219 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241224.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30 Target Full Sequence	1.5	Sequence 7219 from Patent EP2985353	NA	coding protein	psRNATarget
JB169555.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||=|||||||||||||*|||||| targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30 Target Full Sequence	1.5	Sequence 7219 from Patent EP2559767	NA	coding protein	psRNATarget
HI403356.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||* targets:17   CUCCGUUUCUUUUUAUUUGUCGCC   40 Target Full Sequence	2.5	Sequence 1481 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235486.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||* targets:17   CUCCGUUUCUUUUUAUUUGUCGCC   40 Target Full Sequence	2.5	Sequence 1481 from Patent EP2985353	NA	coding protein	psRNATarget
JB163817.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *||||||||||||||||*|||||* targets:17   CUCCGUUUCUUUUUAUUUGUCGCC   40 Target Full Sequence	2.5	Sequence 1481 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240753.1	ncRNA:24   AAGG-CAAAGAAAAAUAAUCAGCGA   1   *|||-|||||||||||||||*|||| targets:14   CUCCAGUUUCUUUUUAUUAGGCGCU   38 Target Full Sequence	1.5	Sequence 6748 from Patent EP2985353	NA	coding protein	psRNATarget
JB169084.1	ncRNA:24   AAGG-CAAAGAAAAAUAAUCAGCGA   1   *|||-|||||||||||||||*|||| targets:14   CUCCAGUUUCUUUUUAUUAGGCGCU   38 Target Full Sequence	1.5	Sequence 6748 from Patent EP2559767	NA	coding protein	psRNATarget
HI408623.1	ncRNA:24   AAGG-CAAAGAAAAAUAAUCAGCGA   1   *|||-|||||||||||||||*|||| targets:14   CUCCAGUUUCUUUUUAUUAGGCGCU   38 Target Full Sequence	1.5	Sequence 6748 from Patent EP2074227	NA	coding protein	psRNATarget
EZ061437.1	ncRNA:24   AAGGCAAAGAAAAAUAAUCAGCGA   1   *|||*||||||||||||*|||||| targets:174   CUCCAUUUCUUUUUAUUUGUCGCU   197 Target Full Sequence	1.5	TSA: Zea mays contig62559, mRNA sequence	NA	coding protein	psRNATarget