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BaseInfo

ncRNA ID	novel_zma_miR1722
Species	Zea mays
Class	miRNA
Genome position	Chr5:14595083-14595202 [+]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089712
Length	24
Mature sequence(if miRNA)	97 - AUCGGGCACUCGGCAAAGCAGGCU - 120
Stem-loop(if miRNA)	--   A                    U  -            AUCA       A     C  C   UCU CUUUGCCGAGUGUCUGAUGG GA CACUCGGUAAAG    CUACCGG AUUCG GC U   ||| |||||||||||||||||||| || ||||||||||||    ||||||| ||||| ||   GGA GAAACGGCUCACGGGCUAUU UU GUGAGCCGUUUC    GGUGGCC UGAGC CG U UC   C                    U  C            ----       G     -  U
Stem-loop sequence	UCUACUUUGCCGAGUGUCUGAUGGUGACACUCGGUAAAGAUCACUACCGGAAUUCGCGCCUUUGCCGAGUGCCGGUGGCUUUGCCGAGUGCUUUUUAUCGGGCACUCGGCAAAGCAGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   UCGGACGAAACGGCUCACGGGCUA   1   |||||*|||||||||||||||||* targets:12   AGCCUUCUUUGCCGAGUGCCCGAC   35 Target Full Sequence	2.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:24   UCGGACGAAACGGCUCACGGGCUA   1   ***||*|||||||||||||||||* targets:141   UAACUUCUUUGCCGAGUGCCCGAA   164 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   UCGGACGAAACGGCUCACGGGCUA   1   ***||*|||||||||||||||||* targets:141   UAACUUCUUUGCCGAGUGCCCGAA   164 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UCGGACGAAACGGCUCACGGGCUA   1   ***||*|||||||||||||||||* targets:2160   UAACUUCUUUGCCGAGUGCCCGAA   2183 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UCGGACGAAACGGCUCACGGGCUA   1   ***||*|||||||||||||||||* targets:2160   UAACUUCUUUGCCGAGUGCCCGAA   2183 Target Full Sequence	2.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
XM_008671736.2	ncRNA:24   UCGGAC-GAAACGGCUCACGGGCUA   1   |||**|-|||||||||||||||||* targets:248   AGCAGGACUUUGCCGAGUGCCCGAC   272 Target Full Sequence	3.0	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget